Populus nigra (Lombardy poplar): 133677593
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Entry
133677593 CDS
T10372
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133677593
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133677593
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133677593
microRNA pathway
RISC loading complex
133677593
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133677593
NCBI-ProteinID:
XP_061955659
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Position
17:12801227..12809360
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AA seq
921 aa
AA seq
DB search
MESNEEPEALTPPPDALPPPPPEIPPNVVPVQLTTDTFLEETKKISKIKRSPITRRGVGS
RGQKIQLVTNHFKVSISNTGGHFFHYSVSLYYEDGRPVDAKGIGRRLIDKVHETYGSDLA
GKDFAYDGEKSLFTIGALPRNKMEFTVLLDSFSSNRNSGNGSPVGNGSPNETDKKRMRRA
FQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSF
FHNNPKNYVDLGGGVLGCRGFHSSFRALQGGLSLNMDGSTTTIIQPGPLIDFLIANQNVS
NPFQIDWAKAKRTMKNLRIKVSPTNQEYRITGLSENSCKEQMFSLKSRAADGNDVESFDI
TVYDYFVNHRSIDLRYSGDLPCINVGKPKRPTYIPVELCSLLSLQRYTKALTVHQRSQLV
EKSRQKPQEKIRILADVMKSNNYAAEPMLRSCGITISSQFTQVQGRVLPAPKLKAGNGED
VIPRNGRWNFNNKRFFEPSKIENWAVVNFSARCDVRGLVRDLIKFGEMKGILISDPMDVL
EENAQFRRAPPPVRVDKMFEQIQTAFPDAPPRFLVCLLPDRKNSDIYGPWKRKNLAEYGI
FNQCLAPTRVNDQYILNVLLKINAKLGGLNSLLAMEQSRNIPFVSKVPTIIFGMDVSHGS
PGQSDIPSIAAVVSSRNWPQLSRYRASVRSQSPKVEMVDSLFKLTADKKDDCGIVRELLL
DYYKSSGQTKPAQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKN
HHTKFFQDGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSA
DDLQELIHSLSYVYQRSTTAISLVAPVRYAHLAATQISQFLKFDDMSETSSSHGGLTSAG
QAPVPELPELHHNVRSSMFFC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagtctaatgaagagccagaggccctcactcctccacctgatgccctccctcctcct
ccacctgagataccaccaaatgtagttcctgttcaattgacaacagacacttttcttgag
gaaacaaaaaagatatcaaaaataaaacgttccccgattaccaggcgtggagttgggtct
agagggcaaaaaatacaactagtcacaaatcatttcaaagtttctatctctaatactggt
ggccacttttttcactacagtgtttccttgtattatgaggacggtcgccctgtcgatgca
aagggcattgggagaagattaattgacaaagttcatgagacttatgggtcagatcttgcc
gggaaggactttgcatacgatggagagaagagcttattcacaattggtgctctgccacga
aacaaaatggaattcactgttttgcttgatagtttctcatcaaataggaattctggaaat
ggaagccctgttggcaatggaagtccaaatgagactgataaaaagaggatgaggcgggca
ttccagtccaaaacatttaaagtggagatgagttttgctgccaaaatccctatgcaagct
attgcagctgctttgcgtggtcaagaatcggaaaactctcaggaagccttaagagtctta
gacatcattttaagacagcatgcagctaaacagggttgccttcttgttcgccagtcattc
tttcacaataatccaaagaactatgttgatctgggaggaggagtccttggatgccgagga
tttcattcgagctttcgagctttgcagggtggattatccctaaatatggatggttcgact
acaacgataatacagcccgggccacttattgactttctcatagccaaccagaatgtgtcg
aacccttttcagatcgactgggcaaaggcaaagcggacaatgaaaaatttgaggataaag
gtgtcacctaccaatcaagagtacagaatcactggcctaagtgaaaatagttgcaaagag
caaatgttttcgctgaaatcaagagcagctgatggaaatgatgttgaaagttttgacatt
acagtttatgattattttgttaatcatcgcagcatagatttacgttactctggagatttg
ccatgcatcaatgttggcaagcctaaaaggcctacttacattcctgtcgagctttgctca
ctgctttccttgcaacgctacacaaaggcactgactgtccatcagagatcgcagttagta
gaaaaatcaagacaaaaaccccaagaaaagattaggatcttagctgatgtaatgaaaagc
aacaactatgctgcagaaccaatgctgcgttcttgtggcatcaccattagcagccagttt
actcaagttcaaggccgtgtgcttcctgctccaaagttaaaagcaggaaatggtgaggat
gttattccaagaaatgggcggtggaattttaataataagagattttttgaaccttctaaa
attgaaaactgggcagtggtgaacttttccgcccgttgtgatgtgcgtggtctagtcaga
gatttgataaaatttggagaaatgaaagggattctcataagtgacccgatggatgttctt
gaagagaatgctcagtttcgacgggcaccacctcctgttcgagtggataagatgtttgaa
cagatacagacagcttttccagatgctcctcctcgctttctcgtgtgtcttcttcctgat
aggaagaactctgacatatatggtccttggaaacgaaagaatcttgcagaatatggaatt
ttcaaccaatgcctggcacccactagagttaatgatcagtatatattgaatgttctcctg
aagataaatgctaagctcggtggtttgaattctttgttggctatggagcaatcacgaaac
atcccttttgtttcaaaagttcctacaataatatttgggatggatgtatcacatggctcg
cctggtcagtctgacatcccatccattgctgcggttgtcagttctagaaactggcctcaa
ctttctcgttatagagcttctgtgcggagtcagtcaccaaaagttgagatggtagattct
ctttttaaactaacagcagataagaaagatgattgtgggattgttagggaattgttgtta
gactactataagagttctggccaaacaaagccagctcagataatcatattcagggatgga
gttagtgagtcgcagttcaatcaagtcctcaacatcgagctggatcaaatcattgaggcc
tgcaagttccttgatgaaagctggtcacccaagttcactgtaattgttgcacagaaaaat
caccacactaaattcttccaagatggatctccggacaatgttcctcctggaactgttatt
gataatgctgtttgtcacccacaaagctatgatttctacatgtgtgcccatgcagggatg
ataggaacaactaggccaacacattatcatgttcttttagatgagattggcttttcagct
gatgatctacaggagttgattcactctttgtcttatgtgtaccaaagaagcacaacagca
atatccctagttgctccagtccggtacgcacacttggcagcaactcagatttcacaattc
ttgaagtttgatgacatgtcagagacatcttcgagccatggaggtctgacttctgctggg
caagcacctgtgcctgagcttcctgagctacaccacaatgtccgcagctctatgtttttc
tgctga
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