Populus nigra (Lombardy poplar): 133677621
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Entry
133677621 CDS
T10372
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00906
Carotenoid biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
133677621
Enzymes [BR:
pnz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
133677621
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
Thi4
HI0933_like
GDI
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
133677621
NCBI-ProteinID:
XP_061955713
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Position
17:9573498..9578945
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AA seq
613 aa
AA seq
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MSLGFKNSLFFGQFNTVQLGSSKSRSQKHRILSIEPVRTSVFDGYIVPRNIKGKIDNLGR
VKLNKDFVLRSKSVLTVDKELDVDGNGGLGRERSNYDAIVIGSGIGGLVAATQLAVKGAK
VLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDP
TTVHFHLPNDLSVQVHREYTDFISELAAKFPHEKDGILKFYGECWKIFNALNSLELKSLE
EPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYMKDPQLLSFIDAECFIVSTVNALQTP
MINAAMVLCDRHFGGINYPVGGVGGIAKSLSKGLVDQGSEILYRANVTNIILEHGKAVGV
RLSDGREFFGKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEV
LPSDTDCHHFVLEDDWARLEEPYGSIFLSIPTILDSSLAPEGHHILHIFTTSSIEDWEGL
STKDYEAKKKVVADEIISRLEKKLFPGIRSSIAFMEVGSPKTHRRYLARDKGTYGPMPRR
TPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKKSPVLDA
ALLRLLGWLRTLA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggattcaagaattccctattttttggccagttcaatactgtccagttaggg
agttccaaatccagaagccaaaaacataggattctgtctatagaacctgtccgaacctca
gttttcgatggttatattgtacccagaaacataaaaggcaaaattgacaatcttggtaga
gtaaagttgaataaggactttgttttgaggtcaaagtcagtgttgactgtggataaagag
ttggatgttgatgggaatggaggattgggtagagagaggagcaattatgatgcaattgtt
attgggtctggtatcggtgggttggttgctgctacacagttggcagtgaagggagctaaa
gttttggtcttggagaagtatgtgattcctggtgggagttctgggtattatgagagggat
ggatatacttttgatgttggctcttctgttatgtttggtttcagtgataagggcaaccta
aatttgataacacaggcattggcagcagttggctgtgaaatggaggtgattcctgaccca
actactgtccattttcatctacccaatgacctttctgttcaagttcacagagagtacacc
gacttcatctcagaacttgctgctaaatttccccatgaaaaggatgggatccttaaattc
tacggtgaatgctggaagatattcaatgccttgaactctctggaactgaagtcacttgag
gagccaatctacctgtttggacaattttttcagaaacctcttgaatgcttgacgctggct
tattatctacctcaaaatgctggagatattgctcgaaagtacatgaaggatcctcagtta
ttgtctttcattgatgcagagtgtttcatagtgagcacagtcaatgctttgcagactcca
atgatcaatgcggccatggttctatgtgataggcattttggagggatcaattaccctgtt
ggtggggttggtggaattgcgaagtccttatcaaaaggtctggttgatcagggaagtgaa
atactttacagggcaaatgtgaccaacatcattcttgagcatggaaaggctgtaggagta
aggctttcagatggaagggagttctttggaaaaaccataatctcaaatgctactagatgg
gataccttcgggaagttgttaaaaggagaaacccttccaaaagaagaagaaaatttccaa
aaagtttatgttaaggctccatcttttctttccattcacatgggtgttaaagccgaggtt
ctaccatcagatacagattgccaccactttgtgcttgaggatgactgggcaagattagag
gagccttatggaagcatatttctaagcattccaactattcttgattcgtcattggctccg
gaaggccatcatatacttcacatatttacaacgtcttccattgaagactgggagggactc
tcgacaaaggactatgaggccaagaagaaggttgtggctgatgagattataagcagattg
gagaagaaactttttccagggatcagatcatcaattgctttcatggaggtgggttcaccc
aagacacacaggcggtacctggctcgtgataagggtacttatggaccaatgccacgcaga
actcctaaaggtttattgggaatgccattcaatacgacagctgtagatggtctttactgt
gttggtgatagctgctttccaggacagggtgtgatagctgtagctttttcaggagtaatg
tgtgctcatcgagtagctgctgatattggcattgagaaaaagtctcctgtactggatgct
gctctccttcggcttcttggctggttaaggaccttggcatga
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