Populus nigra (Lombardy poplar): 133677718
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Entry
133677718 CDS
T10372
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133677718
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133677718
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133677718
NCBI-ProteinID:
XP_061955832
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Position
17:8092221..8096508
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AA seq
386 aa
AA seq
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MGNSHDHGHRRKFRDNGNVPFPDKTAAAPSASQPVPPFIYQPQIPTSSTRTPKMATALPY
PHVDSSLRALAAQAEGFGRSATGGLHGPIYYVTTLADDGPGSLRDGCRKKEPLWIVFEVS
GTIQLRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIK
PKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCYFGQHDKTMLIGADPTHVGDRCIRV
TIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQSNIYEAGQKKIA
FKYLSEKAADKEKARSGSIRSEGDLFVTGTQAGLMTEDGECSMFHPSEYYPTWTVEPPTD
SLKQVLQHCTGWQCVPRPADQPLAAQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactctcatgatcatggacatcgccgcaagttccgtgacaacggaaacgttcct
ttccccgataaaactgctgcagctccttcggcatcacagcctgtcccaccctttatttat
caaccccagattcccacctcatcaacccgcacacctaagatggctaccgctttgccttac
cctcatgtcgactcttccttacgtgctcttgctgcccaagccgagggctttggtcgctct
gccactggtggcctccatggccccatttattacgtcactaccttagcagatgatgggcct
ggatcacttagggatggatgtcgtaaaaaggagccactttggattgtctttgaagtatca
ggcactattcaacttagatcttacttgaatgtttcgtcttataaaaccattgatggccgg
ggccaaagaataaaacttacaggcaagggtttgaggctgaaggaatgtgaacatgttatt
atatgcaatttagagtttgaaggtggtagaggacctgatgttgatggcattcagataaag
cccaagtcaaagcacatatggatagatcgttgcagccttcgtgattatgatgatgggttg
atagatatcacacgagaaagcacagatattactatttctaggtgttactttgggcaacat
gacaaaacaatgctaattggagcagatcctactcatgttggtgacagatgtattcgagta
accatccatcattgcttttttgatggaacaagacagcgccatcctcgtgttagatttgga
aaagtacatttatacaataactataccagaaactggggcatttatgctgtttgtgccagt
gtagagtcacagatctactcccaaagcaacatatatgaagcagggcagaagaagattgca
tttaaatatctttctgagaaggcagctgacaaggagaaagcaaggagtggcagcataagg
tctgaaggagacttatttgttactgggactcaagcagggttaatgactgaggatggtgaa
tgctctatgtttcatcccagtgaatattaccccacatggacagtagaacctcctacagat
agccttaaacaggttctccagcattgtactggatggcagtgtgttccacggccagccgat
cagccactagctgcacagtga
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