Populus nigra (Lombardy poplar): 133677827
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Entry
133677827 CDS
T10372
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133677827
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Motif
Pfam:
Sel1
TPR_2
TPR_CcmH_CycH
TPR_12
TPR_6
Motif
Other DBs
NCBI-GeneID:
133677827
NCBI-ProteinID:
XP_061955941
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Position
18:3510173..3515646
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AA seq
682 aa
AA seq
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MQRHILTLSLLIFSLLPLSLLARQYFLILSQEDLKDIPSSPTTTSSDVDPNESPPEWDEF
GDSDSKPEHELDPGSWRPIFEPDATTSSTSASKLDPEMEQYYSAVEKMFSAVSDSEVRVV
EEAVAEIEELATVKGNSHAQSVLGFLYGLGQIKERDKAKAFLYHHFAADGGSLQSKSALA
YTYYRQQMYENAVKLYAELAEVAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEDD
DVFQILEYQAQKGNAGAMFKIGYFHYFGLRGLRRDHAKALAWFSKAVEKGEPRSMELLGE
IYARGAGVERNYTKALEWLTLAAKQQLYSAYNGMGYLYVKGYGVQKKNYSKAKEYFERAA
DHEDAGGHYNLGVMHLKGIGVKRDVRLACQYFIVAANAGQPKAFYQLAKMFHMGVGLKKN
LPMATALYKLVAERGPWNSLSRWALESYLKGDVGKAFLLYSRMAELGYEIAQSNAAWILD
KYAEGSMCMGESGFCTDSERHQRAHFLWWQASEQGNEHAALLIGDAYYYGRGTERDYERA
AEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLALAS
LWIRKNYADSFMVHVIDSLPGVYPKIKAWVENIILEEGNAAILTLFVCLLTVLYFRERQR
RNAAVEVGIQDQHIHHAPAALN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacacatactcacactctctcttctaattttctctctcctcccactctctctc
ctcgcccgccagtactttctcatcctctctcaagaagacctcaaagacatcccttcctcc
ccaaccactacctcctccgatgtggaccccaatgagtctccacccgagtgggacgagttc
ggcgactctgactccaaacccgaacacgaactcgaccctggctcctggcgcccgatcttc
gaacccgacgccaccacatcctccacctctgcatcgaaactcgatccggagatggagcag
tactactccgccgtggagaagatgttttcggctgtgagtgacagtgaggttagggttgtg
gaggaagcagtggcggaaattgaggaattggcgacggtgaaggggaattcccatgcccaa
tcggttttagggtttttgtatggattagggcaaattaaagagagggataaagctaaggct
tttttgtatcatcactttgcagccgatggaggcagtttgcagtctaaatcagctcttgcc
tacacgtattaccggcagcagatgtatgaaaatgcggttaaattatatgcggaattagca
gaagtagcagtaaatagttttttgatttcgaaggattccccggtgattgaaccggttagg
atacataatggggccgaggagaataaagaggctttgaggaaatcacgaggggaggatgac
gatgtgttccagattttggaatatcaagctcaaaaggggaatgcgggagcaatgtttaaa
attgggtattttcactactttggattgagaggattgaggcgtgatcatgccaaagctttg
gcatggttttcgaaggctgtagagaaaggggaacccaggtcaatggaacttcttggtgaa
atatatgcccggggagctggagttgagaggaactatactaaagcgcttgaatggcttaca
cttgctgcaaaacagcagctttattcggcttataatggcatggggtatttgtatgtcaag
ggttatggagtgcaaaagaagaactacagtaaagcaaaagaatactttgagagggctgct
gaccatgaagatgctggtgggcactataaccttggagtaatgcatcttaaagggattgga
gtaaagagagatgtaaggttggcttgccagtattttatagtagctgctaacgcaggtcaa
ccaaaggcattttaccagctggcaaagatgtttcatatgggggtggggcttaaaaagaat
cttcctatggctactgcgttatacaaactagtagcagaacggggcccgtggaactccttg
tctagatgggcattggagtcatacctaaaaggtgatgtgggcaaagcattcctgttgtat
tcaaggatggctgagctgggctatgaaattgcacaaagtaatgctgcatggattcttgac
aaatatgcagagggtagcatgtgtatgggggaatctggtttttgtacagactcggaaaga
caccagcgtgcccattttttgtggtggcaagcttcagaacagggcaatgaacatgctgct
ttgcttattggcgatgcatattactatggtaggggtactgagagggattatgaacgagcg
gcagaggcttacatgcatgccaaatcgcaatctaatgcgcaagctatgttcaatcttggt
tacatgcatgaacatggtcaaggacttccactcgaccttcatcttgctaagcgttactat
gaccaagctcttgagatcgatcctgcagcaaagttacctgtcacactagccctcgcaagc
ttgtggataagaaagaactatgcagacagtttcatggtacatgtaattgattcattgcct
ggagtctatccaaaaatcaaagcatgggtggagaatattatcctggaagaaggaaatgca
gcaatacttactctttttgtctgtctgcttacggttctctattttcgtgaacggcaacga
aggaatgctgctgttgaggttggcatacaagaccaacatatccatcatgcacctgctgca
ctcaattag
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