Populus nigra (Lombardy poplar): 133677908
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Entry
133677908 CDS
T10372
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133677908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133677908
Membrane trafficking [BR:
pnz04131
]
Endosome - Golgi transport
Others
AP-1 complex
133677908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
INTS1_R4
HEAT_EZ
Atx10homo_assoc
Arm_2
Cnd3
Motif
Other DBs
NCBI-GeneID:
133677908
NCBI-ProteinID:
XP_061956030
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All DBs
Position
1:complement(41769970..41776608)
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AA seq
904 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESVKDLISDNNPMVVA
NAVAALTEIQDNSVRPVFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAPDAREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNLLDPSLLDELLANIATLSSVYHKPPETFVTRVKTTAQKTEDDEYAE
GSEAGYPESSAHPADGATSPPTSSSNVAYAGATQPAPAPSSSPPAAPVPDLMGDLLGMNN
SSIVPVDQPSTPPGPPLPVLVPASTGQGLQISAQLIGRDGQIFYSLLFENNSQIPLDGFM
IQFNKNSFGLAAAGPLQVPQLQPGTSAAVLLPMVLFQNMSAGPPSSLLQVAVKNNQQPVW
YFNDKISLHVFFTEDGRMERGSFLESWRSLPDSNEVSKDLPDVTVNGVESTLDRLAASNM
FFIAKRKHSNQDVFYFSTKIPRGVAFLIELTTVVGTPGVKCAIKTPNPEMAPLFFEAIET
LLKS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgattcaaagtatttctcgacgaccaagaagggtgaaatccctgagctc
aaagaagagctcaattctcagtacaaggataagagaaaagatgctgttaagaaggtgatt
gctgcaatgacagttgggaaggatgtatcgtcactgttcacagatgtagtgaactgtatg
cagacagaaaatttggagctcaagaagctggtttatttatatcttataaattatgctaaa
agccagcctgatttggcaatacttgcagtaaatacatttgtgaaggattcacaagatcca
aatcccttgattcgagctttggctgtgcggacaatggggtgcattcgtgttgacaaaatc
acagagtatctatgtgatccgcttcagaggtgccttaaggatgatgatccttatgttcgc
aagacagcagccatttgtgtagccaaactttatgacataaatgccgagcttgttgaggat
agggggtttttggaatctgtcaaggatttgatttctgacaacaatcccatggttgtagcc
aatgctgtggcagctcttacagaaattcaagacaatagtgtcagacccgtctttgagatt
actagtcacacgctctcaaagctgcttactgctcttaatgagtgcacagagtggggccaa
gtttttattttggatgcgctatccagatacaaggcacctgatgctcgtgaagctgaaaat
atagtggaacgagttactccaaggctacaacatgctaattgtgcagttgtactttcagct
gttaagatgatccttcaacaaatggaacttataactagcactgatgtggttcgaaatctt
tgcaagaagatggctcctcctcttgttacgttactctctgcagagccggagattcagtat
gttgctttgcgtaacatcaacctaattgtacaaagacggcctacgatccttgcccatgag
attaaggtgtttttttgcaagtacaatgacccaatttatgtgaagatggagaagctagaa
atcatgataaagcttgcttcagaccgtaatatagatcaggttctactggagttcaaagag
tatgccacagaagttgatgtagattttgttagaaaggctgttcgtgccattggccgttgt
gcgatcaagttagagagagctgccgagcgatgtatcagtgttctcctagagttaatcaag
attaaagtaaactatgtggttcaagaggctatcatagttattaaagacatctttaggaga
taccccaacacttatgagtcaatcattgcgacactctgtgagagcctagacactctagac
gaaccagaagccaaggcttcaatgatctggattattggtgaatatgctgaaagaattgac
aatgctgatgagctcctagagagcttcttggagagtttccctgaagagcctgcacaagtc
cagttgcaattgctgactgcaactgtcaaactcttccttaagaagccaactgaaggccct
caacagatgattcaggttgttttgaataatgccactgtggaaactgacaatcctgatcta
agggatcgtgcatacatatattggcgtctgctatcaactgatcctgaggctgctaaagat
gttgtgttagctgagaaacctgtcatcagtgacgattcaaacctactcgatccatctctt
cttgatgagcttcttgccaacattgcgacattgtcgtctgtgtatcacaaacccccagaa
acatttgtaacccgtgtgaagactacagctcagaaaactgaagatgatgaatatgctgaa
gggagtgaagcagggtatcctgaatcatctgctcatcctgctgatggtgcaacatcaccg
cctactagttcaagtaatgttgcatatgccggagcaacacaaccagctcctgcgccgtct
tcaagtccacctgctgctcctgtgccagatttgatgggtgatctgttgggcatgaataat
agttccattgtgcctgttgaccagccctccactcctcctggccctcctttgcctgttcta
gtaccagcatccactggtcagggtttacaaatcagtgcacagcttatagggcgggatggt
cagatattttacagtttattgtttgagaacaactcacagattcccctggatggattcatg
atccagtttaacaagaattcgttcggtcttgcagctgctggacctctgcaggttccgcaa
ttgcaacctgggacatcagcggcagttctgctacctatggttttgtttcagaatatgtct
gctggtcctccaagctcactcttgcaagttgctgtgaaaaataatcaacagcctgtatgg
tatttcaatgacaaaatctcattgcatgtattcttcaccgaggatggaaggatggaacgt
ggaagctttcttgagtcatggaggtcccttcctgattcaaatgaggtctcaaaggatttg
ccggacgttactgtgaatggtgtagaatctacattggaccggcttgcagcatcaaacatg
ttctttatagcaaagcgaaagcattcaaaccaggatgtgttctacttctctactaaaatc
cctagaggagttgccttcttaatcgaactcacgacagttgttggaacccctggggtcaag
tgtgccatcaagactccaaaccccgagatggcaccgcttttctttgaagccattgagact
ctcctcaagagttaa
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