Populus nigra (Lombardy poplar): 133677915
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Entry
133677915 CDS
T10372
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133677915
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
133677915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133677915
NCBI-ProteinID:
XP_061956038
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Position
18:complement(3231965..3236623)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFQPRNDGGDNNNGSRSRFPTRQTWVPRGSNPSLPLNGDVNPNPNPNPNPNPPSSFSSR
NNGNGGHSSHGTGVADYRYKGGVNAPRGGQMGRGKERGVETREVKDPNLPQLAQEIQEKL
VKSTVECMICYDMVRRSAPIWSCSSCFSIFHLNCIKKWARAPTSVDLIAEKNQGFNWRCP
GCQSVQLTSLKDIRYVCFCGKRTDPPSDLYLTPHSCGEPCGKQLEKEVPGADGSREGLCP
HNCVLQCHPGPCPPCKAFAPPSLCPCGKKRITTRCADRKSVLTCGQRCDKLLECWRHRCE
QICHVGPCNPCQVLINASCFCKKNTEVILCGDMAVKGEVKAEDGVFSCNSTCGKVLGCGN
HICGETCHPGDCGDCEFMPGRVKSCYCGKTSLQEERNSCLDPIPTCAQICGKSLPCGMHP
CKEVCHSGDCAPCLVSVTQKCRCGSTSRTVECYKTTSENEKFLCDKPCGRKKNCGRHRCS
ERCCPLSNSNNQFSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCA
CGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHPASHSCHFGDCPPCSVPVAKECVGGHVIL
GNIPCGSRDIRCNKLCGKTRQCGLHACGRTCHSPPCDTSPGTETGSRASCGQTCGAPRRD
CRHTCTALCHPYAPCPDVRCEFPVTITCSCGRMTASVPCDAGGNTGGYNDTILEASILHK
LPAPLQPVESSGKKIPLGQRKFMCDDECAKFERKRVLADAFDINPPNLEALHFGENSSVT
ELIGDLYRRDPKWVLAVEERCKYLVLSKSRGTTSGLKIHVFCPMLKDKRDAVRLIAERWK
VAIYSAGWEPKRFIVIHATPKSKTPSRVIGIKGATTLSASHPPVFDALVDMDPRLVVSFL
DLPREADISSLVLRFGGECELVWLNDKNALAVFNDPARAATAMRRLDHGSVYYGAAVVPQ
NSGASMGSPATNAWGTAGIAKEGMITALKGTSWKKAVVQESGWRGDSWGDEEWSGGGSAD
VQASAWKGKEHPISTSINRWSVLDSDKADSSSAASVRIEDPAKRVAEILSSSVLESNVST
SNISVQTAMQPGGVSSEEDLSEVVDDWEKAYD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccagcccagaaatgacgggggagataataataatggtagcaggtccagattc
ccgacccgacaaacgtgggttcccagaggatctaatccttctcttccgctgaatggggat
gtaaacccaaacccaaacccaaacccaaacccaaacccaccttcgagtttcagctctaga
aacaatggaaatggtgggcattctagccatgggactggagtagctgattataggtataag
ggtggtgtgaatgcacctagaggtggtcaaatgggtcgggggaaggagaggggggtggag
actcgggaagtgaaggacccgaatttgccgcaacttgcgcaagaaattcaggagaagctt
gtgaagagtacggttgagtgtatgatttgttatgatatggttcggaggtctgcgcctatt
tggtcttgttcgagttgtttctcgatttttcacttgaattgtatcaagaaatgggctcgt
gcgccgacgtctgttgatttgattgcggagaagaatcaaggttttaattggcggtgtccg
ggatgtcaatctgtgcagcttacgtcgttgaaggatattcggtatgtttgcttttgtgga
aagaggacggatccgccttcggatttgtatttgactccgcattcatgtggggaaccgtgt
ggaaaacagcttgagaaggaggttcctggtgctgatgggagtagggagggtctttgtccg
cacaattgtgtcttgcagtgtcaccctgggccatgtcctccttgtaaggcctttgctcca
ccaagtctgtgtccttgtgggaagaaaagaatcacaacaagatgtgctgatcggaagtcc
gttcttacctgtgggcaacgatgtgataagcttctggaatgttggcgtcatcgatgtgag
cagatttgccatgttggtccctgcaatccttgtcaggtattgattaatgcttcatgtttc
tgcaagaagaacacggaggttattctatgtggggatatggcagtgaagggagaagtgaaa
gctgaagatggtgttttttcttgcaactcaacatgtggaaaggttctgggttgtggaaat
catatttgtggtgaaacttgtcatccaggtgattgcggggattgtgagtttatgcctggc
agggtcaagtcatgctattgtggaaaaacaagtttgcaggaggaaagaaatagttgtttg
gatccaattccaacgtgtgcacaaatatgtggcaaatcccttccttgcgggatgcaccca
tgtaaagaggtgtgccattcaggggattgtgctccttgtttggtttctgtcacccaaaaa
tgccgctgcggatcaacctcccgaactgtggagtgttacaaaactacttcagagaatgaa
aaattcctgtgtgacaagccttgtggtcgaaagaagaactgtggaaggcataggtgcagc
gagcgatgctgccctctttccaactcgaacaatcagttctctggggattgggatccacat
ttttgtcaaatggcttgtgggaagaagttaaggtgtggacaacactcttgtgaatcactg
tgtcacagtggccattgtcctccttgtcttgaaacaattttcactgatttgacatgtgca
tgtgggagaacttccatccctcctccattgccgtgcggcacgcctcccccttcatgtcag
ctcccatgctcagttcctcagccatgtggccatccagcttctcatagctgccacttcgga
gactgcccaccttgttcggtgcctgtagctaaagagtgtgttggtgggcatgtgattctg
gggaacataccctgcgggtcaagggatatcagatgcaacaaactctgtgggaagaccagg
caatgtggtttgcatgcatgtggaagaacttgtcattcaccgccttgtgatacctcacct
ggaactgaaactggctcaagagcttcttgtgggcagacatgcggtgcccctaggagagat
tgccggcatacttgcactgcactttgtcatccttatgctccttgtcctgatgtcagatgt
gagttccctgtcacaattacttgctcttgtggcaggatgacagcatctgttccttgtgat
gctggagggaacactggtggttataatgatactattttagaagcatccattctccacaag
ttgccagcgcctcttcaaccagtggaatcatctggaaagaagattcctcttggccagaga
aagtttatgtgtgatgatgaatgtgccaagtttgagcggaaaagggttcttgcagatgct
tttgatatcaaccctccaaatttggaagctcttcattttggtgagaattcttccgtgaca
gagttgattggtgatctgtacaggcgcgatccaaaatgggtgcttgctgtggaggagagg
tgcaaatatttggttcttagcaagagcagaggaaccacaagtggtcttaagattcatgtt
ttctgcccaatgctgaaggataaaagagatgcagttaggctaattgctgagaggtggaag
gttgcaatttattctgctggttgggagccaaagcgttttattgtaatccatgctacacca
aaatccaaaaccccatctcgtgtgattggcattaagggtgcgacaactttaagtgcctcc
catccaccagtttttgatgctctcgtagacatggatcccaggcttgttgtttcttttcta
gatttgccgagggaggcggatataagctcactggtccttaggtttggtggggaatgcgaa
ctagtttggttgaatgataagaatgccctggctgtattcaatgatcctgctcgagcagca
accgctatgaggaggttggatcatggatcagtatattatggagctgcggtggttcctcaa
aatagcggtgcatccatgggatcaccagctaccaatgcctggggaacggcaggcattgca
aaggaagggatgatcacagctctgaagggaacttcgtggaagaaagctgtagtgcaggag
tctggttggaggggagattcatggggtgatgaagagtggtctggtggtggttctgcagat
gttcaggcttctgcatggaaagggaaagaacatccaatctccacttcaattaaccgatgg
agtgtactggactctgataaggctgacagttcatctgctgcctctgtcaggatcgaggat
cctgcaaaacgagttgcagaaattctttccagttcagttttggaatcaaatgtaagcact
tcgaatatatcagtgcaaactgcaatgcaacctggaggggtttcaagtgaagaagattta
tctgaggtggtggatgactgggagaaggcctatgattga
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