Populus nigra (Lombardy poplar): 133677990
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Entry
133677990 CDS
T10372
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Module
pnz_M00081
Pectin degradation
Brite
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133677990
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NCBI-GeneID:
133677990
NCBI-ProteinID:
XP_061956120
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Position
18:12347763..12350189
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AA seq
400 aa
AA seq
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MKCLVTVLFFLWMASYCSCRLISEATGRRFNVLDYGADGNGKIDATPAFQKAWGDFCQAS
EEMPTLEVPAGKTFLLKSVSFSGPCMSKNPHVLIEGTIVAPNSFDSWDDDDYQKWIGFTA
VVGLIVDGGGRFDGRGEAWWKACNDNDSACSKRRQALHFNKCNGLRLSNLHHVNSQKGHI
CINACDDVEVSNLQILAPDESPNTDGIDISESNHVNIHDSFIGTGDDCIAINGFSTSINV
TGVKCGPGHGISIGSLGKDGAYETVEDVHVKSCAFKGTQNGVRIKTWETGSGYVRKITFE
DITFVNSENPIIIDQQYNPNGNRGGSGIKISDVTYRNVRGSSADEVAIALNCAGKAACTN
IVMDNVKITSSNPGKQIRASCNNAKGTAISASPTVPCLSS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcctagttaccgtgttgttcttcttgtggatggcttcctattgctcatgccgt
ctaatatccgaggctactggaaggaggtttaatgtgctcgactatggtgctgatggaaat
ggcaaaatcgatgctacaccggctttccaaaaagcatggggggatttctgtcaagcaagt
gaagaaatgccaacccttgaagtaccagcagggaagacgttcttgttgaagtcggtctcg
ttcagtggcccttgcatgtccaagaaccctcatgttttgatcgaaggtacaatcgttgca
ccaaacagctttgattcatgggatgatgatgattatcaaaaatggattggattcacagcc
gttgttggtctcattgttgatggagggggaagatttgatggacgaggagaagcttggtgg
aaagcttgcaatgataatgatagtgcctgctcgaaacgtcgtcaggctctccatttcaac
aaatgcaatggtctccgactaagtaacttgcaccatgtcaacagccaaaaaggtcacata
tgcataaatgcatgtgatgatgtcgaagtctccaatcttcaaatccttgcaccagatgag
agcccaaatactgatgggattgatatctctgagtcaaaccatgtcaacatccacgactct
tttataggaaccggtgatgactgtattgccatcaatggtttttccacttccattaatgtt
actggtgtcaaatgcgggccaggccatggtataagtattggaagtctaggaaaggatgga
gcctatgaaacagtagaagatgtccatgttaaaagctgtgccttcaaaggaactcagaat
ggtgtacgaatcaagacatgggagaccggatcaggatatgtcaggaagatcacatttgag
gatatcacatttgtaaattccgaaaaccctattattattgaccaacagtacaatcctaat
ggaaacaggggtggctcaggaataaaaatcagtgatgttacataccgcaatgtgcgtgga
tcttcagctgatgaggtagcaatcgctttgaattgtgctggcaaagcggcttgcaccaac
attgtaatggacaacgttaagattacctcctccaatcctggaaaacaaatacgcgcctct
tgcaataatgccaagggaactgccatctctgcctctccaactgtgccctgcctatcaagt
tga
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