Populus nigra (Lombardy poplar): 133678106
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Entry
133678106 CDS
T10372
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133678106
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
133678106
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133678106
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GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
133678106
NCBI-ProteinID:
XP_061956288
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Position
18:10512098..10516488
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AA seq
563 aa
AA seq
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MATAVISETKKLPRPGRGGYQPHGLTEEEARVRAIAEIVNSMVDLSRKNQTVDLNALKSA
ACRKYGLARAPKLVEMIAALPESDRESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIAT
TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDK
VEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRP
DYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAH
MMPDLPNVGVERDLESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQ
LVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARIDDLGLKCRDVRTR
EAGIQDIHHKIKPEEVQLVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGCNVTCPE
LMGKCSIVRELHVYGTAVPVHGRDAEKLQHQGYGTLLMEEAEHIARKEHRSTKIAVISGV
GTRHYYRKLGYELEGPYMVKFLS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagtaatttccgagaccaaaaaactcccgcggccgggtcgcggcgggtac
caacctcacggactaaccgaagaagaagctagagtccgagccatagccgaaatcgtcaat
tccatggtagacctttcgagaaaaaaccaaaccgttgatcttaacgccctaaaatccgcc
gcctgtcgcaaatacggccttgcacgtgctccaaaactcgtcgagatgatcgcagcgttg
ccggaatccgatcgcgagtcactgctaccgaaactccgggctaaaccggtgcgcaccgca
tcaggaattgcagttgttgccgtcatgtcgaagccgcaccggtgtccgcatatcgcgacg
acggggaatatttgtgtgtattgtcctggtggaccggactctgattttgagtacagtact
cagtcgtatactggttatgaacctactagtatgcgtgcgattcgtgctagatataaccca
tatgtccaggctagaagcaggattgatcagcttaagagactgggtcatagtgtagataag
gtggagttcatattaatgggtggtactttcatgtcattgccagcagattaccgtgattac
tttataaggaatcttcatgatgctttatcagggcacacttctgccaatgttgaggaggca
gttgcgtactctgagcatggtgcaacaaagtgcattggcatgacaattgagacgaggcca
gattattgtcttggtcctcatctacgccaaatgctttcatatgggtgcacacgattggag
attggagttcaaagcacgtatgaggatgttgctcgagacactaatagaggacacactgta
gctgctgttgctgattgtttttgcttggcaaaggatgctggttttaaggttgttgctcat
atgatgcctgatcttcctaatgttggggttgagagagacttggaaagttttcgagagttc
tttgagagtccttcttttagagctgatgggctcaaaatttatcctacacttgtaattcgt
ggaactgggctttatgagctatggaaaactggcaggtatagaaattacccacctgagcaa
cttgtagatattgtagcaaggatcctagccatggtacccccttggacacgtgtatataga
gttcaacgagatattcctatgcctttagttacatctggagttgagaaaggaaatctcagg
gagttagccttagctaggatagatgatttgggcctgaaatgccgtgatgtccgtacacgt
gaggctggaatccaggacatccatcacaaaattaagccagaagaagttcagctagttcgc
cgtgattatactgctaatgaaggctgggaaacatttctttcctatgaggatacacgccag
gatattcttgttgggctactgcgcttacgaaaatgtggctgcaatgttacttgccctgag
cttatggggaagtgctctattgttcgtgaactccatgtttatggaactgcagttcctgtt
catgggcgtgatgcggagaagctgcaacaccagggttatggtacacttttgatggaagag
gcagaacacattgctcgcaaggagcatagatcaaccaaaatagctgtcatttcaggtgta
ggaacccgtcattactacagaaaattgggctatgagcttgaagggccatacatggtgaaa
tttctttcttga
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