Populus nigra (Lombardy poplar): 133678204
Help
Entry
133678204 CDS
T10372
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133678204
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133678204
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133678204
microRNA pathway
RISC loading complex
133678204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133678204
NCBI-ProteinID:
XP_061956425
LinkDB
All DBs
Position
18:2648869..2656661
Genome browser
AA seq
1063 aa
AA seq
DB search
MVRKRRTEIPQSGGESSESQETDTGRGAQPPAERSGPPQQGGGGGGYQGGRGWGPQSQQG
GRGGGYGGGRGRGGMQQQQYGGAPEYQGRGRGQPQQGGRGYGGGRTGGGRGGPSSGGFRP
PAPELHQATPAPYPAVVTTQPMPSEASSSMRPPEPSIATVSQQLQQLSVEQEGSSSQAIQ
PLPASSKSVRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAV
MEQLVKLYRESHLGKRLPAYDGRKSLYTAGALPFQAKDFKITLIDDDDGSGGPRREREFK
VTIKLAARADLHHLGLFLRGQQADAPQEALQVLDIVLRELPTARYCPVGRSFYSPDLGRR
QSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSD
SDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTLKSVVEYFYET
YGFVIQHPQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQER
EKDIMQTVYHNAYHNDPYAKEFGIKISDKLASVEARILPPPWLKYHDTGREKDCLPQVGQ
WNMMNKKMVNGGRVNNWICVNFSRNVQDSVARGFCYELAQMCQISGMDFALEPLLAPVSG
RPEHVERVLKNRYHEAMTKLRPHSKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCC
LTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPG
EDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIKELL
ISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKR
HHTRLFANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVL
WDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIA
SGMAGGRGGAGGGPRQTRGPGANAAVRPLPALKENVKRVMFYC
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagagaagaaccgaaattcctcaaagtgggggtgagagttctgagtcgcag
gaaactgatactggtcggggtgcccagcccccagctgagaggagtggtccgcctcaacag
ggaggaggtggaggaggataccaaggtggaaggggttggggtccccagtctcagcaagga
ggtcgtggaggtgggtatggtggtggacgaggccggggagggatgcaacaacagcaatat
ggtggagcccctgagtaccagggccggggaagagggcaacctcagcaaggaggtcgagga
tatggtggtggtcgtactggaggtggccgcggagggccatcttcaggtggatttagacca
ccagcacccgagctgcaccaagctaccccagctccttatccagctgtggtgaccactcag
cccatgccatctgaggcaagttcttctatgcgaccaccagagccatcgatagcaactgta
tcgcagcagctgcagcaactatctgttgagcaagaaggttcttctagccaggcgattcag
ccgctgccagcctcaagtaaatcggtgaggttccctcttcgaccaggaaaaggtagcact
ggcattaggtgtattgtaaaggctaatcacttctttgctgagctaccagataaggatttg
caccaatatgacgtcaccataacaccagaggtcacatcaaggggtgtaaatcgagctgta
atggaacaactggttaaactgtaccgggaatctcatcttggaaagcgtcttcctgcttat
gatggacggaagagtctatatactgccggagcacttccttttcaggcgaaagatttcaag
atcaccctcattgacgatgatgatggatcaggcgggccaaggagagagagagaattcaaa
gttacaatcaaattggctgctcgtgctgacctgcaccacttgggactttttttgcgagga
cagcaagctgatgcgcctcaggaagcccttcaagttcttgatatagttctgcgtgaattg
cctactgctaggtattgtcctgtgggtcgatcattttattcccctgacctaggaaggaga
caatcacttggtgagggcttggagagttggcgtggtttctatcaaagtattcgtcctact
cagatgggactatcgctgaacattgatatgtcatccacggccttcattgagccactgcca
gtcattgattttgtgactcaattattaaatcgtgatgtttcctctagaccgttgtctgat
tctgatcgtgtaaagattaaaaaggcgctaagaggcgtcaaagttgaagttacacaccgt
ggaaatatgcgcagaaagtaccgtatttctggcttaacatcacaggcaacacgggagctg
actttcccggttgatgaaagaggaaccctgaaatctgtcgtggagtacttctacgaaacc
tatggttttgtaattcaacaccctcaatggccttgtctacaagtaggaaatcaacagaga
cctaattatttgcctatggaggtctgcaagattgttgagggtcagaggtactccaaaaga
ttgaacgagagacagataactgcattgttgaaggtgacctgccaacgtcctcaggaaagg
gagaaagatattatgcagacggtttatcacaatgcataccacaatgatccatatgcaaag
gagtttggtatcaaaatcagtgataagcttgcttcagttgaagctcgcattctgcctccc
ccatggcttaagtatcatgacacaggcagagagaaggattgtcttcctcaagttgggcag
tggaatatgatgaataagaaaatggtcaatgggggaagagtgaataattggatctgcgtc
aatttttcacgaaatgtgcaagacagtgtggctcgaggattttgctatgaacttgcacaa
atgtgtcaaatttctggcatggactttgctcttgagccattgctggctcctgtcagtggt
cgtcctgagcatgtagaaagggttttgaaaaatcgataccatgaagcaatgaccaagctc
cggccccatagcaaggaacttgacttgcttattgtgattctccctgacaacaatggttct
ctttatggtgatttgaagcgtatttgtgagacagatcttgggcttgtttcccagtgctgt
ttgacaaagcatgtgttcaaaatgagcaagcaatatctcgctaatgtggctttgaagata
aatgtgaaggttggaggaaggaatacagtacttgtggatgcaatatctagacgtatccct
ctagtcagcgaccgacctactattatttttggtgctgatgttactcatcctcatcctggg
gaggactcaagcccatctattgcagccgtagtggcttcgcaagattggccagaggttacc
aaatatgctggcctggtttgtgctcaagcccatcgacaagagcttatccaagatttatat
aaaacatggcaggatcctgtacgagggacagtgtctggtggcatgatcaaggaacttctc
atatccttccgtagggcaaccgggcagaagccacagcgaattatattctacagagatggt
gtcagtgaaggacagttttatcaagttttgttgtacgaacttgatgctattcgtaaggca
tgtgcttctttagagcccaattaccagcctcctgtgacatttgttgtggttcagaagcgt
catcacacaaggctgtttgcaaatgatcaccgtgaccgcaatgctgttgacaggagtggg
aatatattgcctggtactgttgtggactcgaagatctgccatcctactgaattcgacttc
tatttgtgtagtcatgctgggattcagggcacaagccgtccagctcattaccatgtactt
tgggatgagaacaagtttactgctgatgggctgcagtccctgacaaacaatctttgctac
acatatgcacgatgcacgcgatctgtttccattgtgccacctgcatactatgctcatctt
gctgcatttcgagctcgtttctacatggagccagagacatcagacagtgaatcaattgca
agtggcatggctggtggtcgtggaggtgctggtgggggtcctcgtcaaacacgtggaccc
ggtgctaatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatg
ttctactgctag
DBGET
integrated database retrieval system