Populus nigra (Lombardy poplar): 133678287
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Entry
133678287 CDS
T10372
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1 isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
pnz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133678287
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133678287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133678287
Membrane trafficking [BR:
pnz04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
133678287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
133678287
NCBI-ProteinID:
XP_061956551
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All DBs
Position
18:complement(13754943..13758058)
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AA seq
221 aa
AA seq
DB search
MVKITIVGRVIDGLPLAQGPRYVSEENDNFLCYKQQGEFILKEISRGALIPSMMTIRIDH
HSLNYLIGNGVCFMTLCDSSYPRKLAFHYLQDLQKEFERLDNSLVEKITRPYSFVKFDGV
IGSIRKQYIDTRTQANLSKLNANRKKDLEIITEHISEILQRKRNSEISERLPATTPRTAS
PIWGSPLLEVIALKWTPITTIVAVAAILLWASLVLTDNFII
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggttaagataacaatagttggaagggtgattgatgggctgcctcttgcgcaagggcct
aggtacgtgagtgaagagaatgataatttcttatgttacaagcaacaaggtgagttcata
ctcaaagaaatctcaagaggagccttgataccttccatgatgaccattcgcattgatcat
cactctctcaactacttgattgggaatggtgtctgcttcatgacattatgcgattcttca
tatccaagaaagctagctttccattatctacaagacttgcaaaaggagtttgagagattg
gacaatagcctagttgagaaaattacaagaccatatagttttgttaaattcgatggtgtt
attgggagtattaggaagcagtatatagacacgagaactcaggctaatctatcgaagcta
aatgcgaatcgaaaaaaagatttagaaatcattacagagcacatatcagaaattctgcaa
agaaaaagaaattcagaaatctccgaaagactaccggcaacgactccaagaacagcctct
cctatctggggttctcccctgctagaggtgattgcactgaaatggacaccaattacaacc
attgttgcagttgctgctatcctgttatgggcaagcctagttctcacagataattttatc
atctag
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