Populus nigra (Lombardy poplar): 133678316
Help
Entry
133678316 CDS
T10372
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133678316
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
eIF-5
133678316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
133678316
NCBI-ProteinID:
XP_061956587
LinkDB
All DBs
Position
18:2811083..2820391
Genome browser
AA seq
1370 aa
AA seq
DB search
MGRKKPAARDEENAPAGGGGKSKKKGLMIDDDEYSVGTELSEETQVQDEKVVITGKKKGK
KGNQKDFKEEKGDGEEEEVPEVVFAGKKKSKGKKSGAGGNAGFSSSNFALLGGDEDDDGN
DDDDERSELTGEKDSEEEDEPVASFKGKTKGKGNKGSGGGSLFSASAFDAIDDGEIDGEV
VDKEEDDDDNDVPVIEFTGKKKKSAKGGKKDAGSVFLAASFDGLDENEDDEKKDEDEDFG
AITFSGKKKKSSKSSKKSGSNKFSAALLDDENDEEASVSESVKTNDDVIGVEDEDESVVA
FTGKKKKSSKKKGASNHVFSALGGEDEREVAEMVEPEEPNIVEANDSKVTKSEAVAETSK
NKKKKKGKSGRTAQEEDDLDKILAELGGGASTLKPSEPPPQEEKLNVQPEPVAVPDALVE
KEGEEEKEESAAAKKKKKKKEKEKEKKVAAAAAAAAKEEKLEEAKAETSEPKKTDAKGKA
AEKKLPKHVREMQEALARRKEMEERKAREEEEKRRKEEEERLRQEELERQAEEARRRKKE
REKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQILANAGITVPTADRDNAPTKRPRYQTK
KSKPAHHQANGIKIEEHVEAKGKEQEEQEEVHEVETVELEKAEPVEEEKTEVASVPEENG
MEEDDDDEEWDAKSWDDVNLNVKGAFDDEEDSEPEPVLKKETKSSVPSSRGAAPPSDAKP
AIAVRKPVTSQPMDSRDVENKKIQTEVEVSDKNRKKDAAVKNKGAVSDAIPKQGEENLRS
PICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKL
NVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLRMRNTEFIV
ALNKVDRLYAWKAQRNAPIRKALKQQSKDVQNEFDRRLMEVITQFKEQGLNTELYYKNKD
MGETFNIVPTSAISGEGIPDLLLLLIQWSQKTMIEKLTFRNEVQCTVLEVKVIEGHGTTI
DVVLVNGVLHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKI
TGQGLEHAIAGTGLYVVGRDDDVEDVKESAMEDMKSVMSRIDKSGEGVYVQASTLGSLEA
LLEFLKSPAVSIPVSGIGIGPVHKKDVMKSSVMLEKKKEYATILAFDVKVTPEARELADE
LGVKIFIADIIYHLFDQFKAYIQNLKEEKKREAADEAVFPCVLEIIPECIFNKKDPIILG
VDVLEGILKVGTPLCVPQKDYIDIGRIASIEFNKKSVDYAKKGQKVAIKIVGTNAEEQQK
MHGRHFDNEDQLVSHITRRSIDILKVNYRDDLSIEDWRLVVKLKTLFKIQ
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagaagccagccgcgcgtgatgaggagaacgctcctgcgggtggtggaggg
aagtcgaagaagaaggggttgatgattgatgatgatgagtattcggttgggaccgagttg
tccgaggagacgcaggttcaggacgagaaagttgtgattactgggaagaagaagggtaag
aagggaaatcagaaggattttaaggaagagaagggggatggtgaggaggaggaagtgccg
gaggttgtgtttgctgggaaaaagaagtcgaaagggaagaagagtggtgctggtgggaat
gctggtttttcatcgtccaattttgccttattgggaggtgatgaggatgatgatgggaat
gatgacgacgatgagagatcggagttgactggcgagaaagatagtgaggaggaggatgag
cctgtggcaagttttaaagggaagacaaagggtaaggggaataaggggagtggtggtggt
agtttgtttagtgcatcggcttttgatgctattgacgatggtgagattgatggagaggtg
gtggataaagaagaggatgatgatgacaatgacgtgcctgttattgaatttacaggaaag
aagaagaagtcggcaaagggtggtaagaaggatgctgggagtgtgtttttggcagcgagt
ttcgatgggttagatgagaatgaggatgacgagaagaaagatgaggatgaggattttggt
gcgattactttctctggtaagaagaagaagtcttccaaatctagcaaaaagagtggtagt
aataaatttagtgcggcattgcttgatgatgagaatgatgaagaggcttctgtgtctgaa
tcagtgaaaaccaatgatgatgtgattggcgttgaggatgaagatgagtcggtggttgca
tttactggtaagaagaagaagtcctctaagaagaagggggctagtaatcatgttttttct
gcattgggtggagaggatgagagagaagttgctgagatggttgaaccagaagaacctaat
attgtcgaagctaatgatagtaaggttactaagagtgaagcggtggcagagacttcaaag
aataagaagaagaagaagggtaagagtggaaggactgctcaagaagaggatgatttggat
aagattcttgcggagctaggtgggggggcatctactttgaaaccttctgaaccacctcca
caagaggagaaacttaatgttcagcctgaaccagttgcagtgccagatgctctggtcgag
aaggagggtgaagaagaaaaggaagagtctgctgctgcaaagaagaagaagaagaagaaa
gagaaggagaaagagaagaaggtagctgctgccgctgctgcagcggcaaaggaagaaaag
ctggaggaagcaaaagctgaaacaagtgagccaaaaaagacagatgcaaagggtaaagct
gctgaaaagaagcttcctaagcatgttagagagatgcaagaggcacttgctaggagaaaa
gaaatggaggagagaaaagcaagggaggaagaggagaagaggaggaaggaagaagaggaa
agactaaggcaagaagaacttgagaggcaagcagaagaggctaggcgtaggaagaaggaa
agggaaaaggagaaactcttgaagaagaaacaggaaggcaagcttctaacagggaagcag
aaggaagaacaacggcggctagaggctatgcggaatcaaatacttgctaatgcaggcatc
actgtccctactgcagacagagataatgcacctacaaaacggcccaggtaccagactaag
aagtcaaaaccagctcaccatcaagcaaatggtatcaagatagaggaacatgtagaagct
aaaggaaaagagcaagaggagcaggaagaagtgcatgaggtggaaaccgtagaattagag
aaggctgaaccagtggaggaagagaaaacagaagttgctagtgtacctgaggagaatgga
atggaggaagatgacgatgatgaggaatgggatgcaaagagctgggatgatgtaaatctt
aatgttaagggtgcatttgatgatgaggaggattctgagcctgaacctgtcttgaagaag
gaaacaaagagttctgttccatcttctcgcggtgcagcccctccttcagatgccaagcct
gcaattgcagtcagaaaacctgttacatcacagccaatggattctcgtgatgttgaaaat
aagaaaattcagactgaggttgaagtttctgacaaaaacaggaagaaagacgctgctgtg
aaaaataaaggagcagtttcagatgccatccctaaacagggtgaagagaacctgcgctct
ccaatttgctgtattatgggccatgttgatactggtaaaaccaagctgttggattgtatt
cgaggcaccaatgtgcaagaaggtgaggctgggggtatcacgcaacagattggtgcaaca
tactttcctgctgagaacatacgggaaagaacaaaggaattgaaagctgatgcaaaatta
aatgtccctggtctgttggttattgatacccctggccatgaatcttttactaatctacgg
tcacgcggttcaggtttatgtgacattgctattctggttgttgacataatgcatggcttg
gagccgcaaaccatagaatcactcaatcttttgaggatgaggaatacagaatttattgtt
gcattaaataaagtggacagactctatgcatggaaagcacaacgtaatgcacctattaga
aaggcattgaagcagcaatcaaaagatgtgcaaaatgaatttgacaggaggctcatggag
gtcataactcagttcaaggagcaaggattaaatactgaattgtactataaaaacaaggac
atgggagaaacttttaatatcgtaccgacaagtgcaattagtggagaaggcattccagat
ttgttactgctactgatccaatggtctcagaaaactatgattgagaaactcacattcaga
aatgaagtgcagtgtacggtattggaggttaaggttattgaaggccatggaacaacaatt
gatgttgtgttggttaatggtgtgctccatgaaggcgatcaaatcgtggtgtgcggctta
cagggtcccattgttaccacaattcgggctttgctgacaccccacccaatgaaggaactc
cgagttaaggggacatatcttcaccataaagaaatcaaggctgcacagggtatcaagatc
actgggcagggccttgaacatgctattgctggaactggtttatatgtggttgggcgtgat
gatgatgtggaagatgtcaaggaatccgcaatggaagacatgaagtcagtaatgagtcgg
attgataaaagtggcgagggagtttacgtacaagcatctacccttgggtcattggaagcg
ttgctggagttcttgaagtcaccggcagtaagcattcctgttagcggtataggcattggc
ccagtacataaaaaggatgtcatgaagtccagtgtaatgcttgagaagaaaaaggagtat
gccaccattttggcatttgatgttaaagtgacacctgaggctcgggaacttgcagatgaa
ctaggagtaaagattttcatcgctgatatcatttatcacttatttgatcaattcaaggct
tacattcagaatctgaaggaggaaaagaagagggaagccgctgatgaagctgttttccca
tgtgttcttgagataataccagagtgcattttcaacaagaaagatcctatcatcttgggg
gttgatgttcttgagggcatactcaaggttgggacaccactttgtgttccacaaaaagat
tacattgacattggccgaattgcttccattgagttcaacaaaaaatcagtggattatgca
aagaaaggccagaaggtggccattaagattgtgggaaccaatgcggaggagcagcaaaaa
atgcatggcaggcactttgacaacgaagatcaactagtcagccacattacaagaaggtca
attgatattcttaaagttaattaccgggacgatctgtcaattgaagattggaggctggtt
gttaaattgaagaccctttttaagatacagtaa
DBGET
integrated database retrieval system
