Populus nigra (Lombardy poplar): 133678360
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Entry
133678360 CDS
T10372
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133678360
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133678360
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133678360
NCBI-ProteinID:
XP_061956632
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Position
18:complement(13787037..13793802)
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AA seq
1332 aa
AA seq
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MRTRFLSTDYFSSSPVDTLSFLNLPVPHLDPPPPPEQELHRLLRFFHPLETLSLPIERPP
IDSALSKFISSVLPHFIDFDFRDFLPDRFHQLVFNLQKEEEIERGFGTDSAQEKDNGNNK
HSERLEVIQLEAPELDTFLENVCFSDEGMQLLSEVSEIENDSDLLRPEIEMQYPEKVRES
VYSVEDVTLEFDIDEKACALEYDGSVQEQAHFHHNTFPLLEVEEMSLRTFTNPSMEDEFL
LFLEHVESKWGQENILHIDGKELLGSMQFDILEFLSKHCPEKQCLEPELASLDTSLGMDI
ISMVEIPHGREDSADCLSPMNPVIFQEFKFLETDSSQLYEVFFEMQSTDEPQTCDSMFRE
DMNFKNFDELIVSCELTLEDDTFKSLPIPIFSDPDKLSSIYAIMEEKLAELKPQPLSASH
GIYLDWHLLEEDNYNGKNSSIYQKMLEELDSHNIDFDRESFDGGKLVIDLVFSDNGLSGA
QMEEHKELLNVTSETPNSGLVEGASSESLDRRQETGNRETLIGENAGKASLLFNSMSQFN
DLDYFLNPGKATARGKNESTVKIPDTRASFPKGSKSHSVPGMNENINDQKLEELLNLAPI
EDKFNMTSSEAADKAEACSIPLQVPYATKTEKTQGDMIYFPDIVIIVNTQNFDKEMIVSR
RSTYQRILAMEKEGAQVVERDLNLPVDVIISSSICLVWYDCGNIGKKATAADEASSCLPL
CIENIAANVLTLLSFAFSGCILVFEGETRFLSTVMEFSDGLYAAAASLGIDLQLFSSYSA
ELTDEIILNSILYATKSSRGRYPKMPESETLAESFLTKFPSINPLTAHAILSSGGMLIEF
LEWSHERRILAVQQYHVPVESVALFSALCKYGEREDSRSIMTDCSSSASSCPDSDKPHLH
IDSERKRRKCINSLQKIDIQVDDMWKSKSLNQFTDGMLDPGVFKQYDCWTSTDPEMLGEL
KQPSSSLKDLFGQKQVPDIAPVMDFPTSMKPLYSGNFKDPLIRDDIRQPRLPLNDIFVGQ
NRASEINMKKELKLDSGNPCKSNANNLHEYFRGEVIDLTDDPVSLEKDVASIANSTYFSP
WMPDIEQDSARKSKAARRLSFGKNSHPNNPTAAEKNSCPDLWTPIENDRQRLPQNRGDPI
MDDKHEKVPVKRRKNLLEEAFTLRAAGKSTRFPFEEEISHCGGSGTPLSKAIHSAHPQPG
SPWTIEFLNRVREKSRLRQQSLPPDTCTPDFWNSGNISKATERRSLSILDFFKYQGGSTP
RKVYDQKKQKQPIQLSRSSQKERTSASLIPTWTPKDKRSKQTLSFAMDGGNQTRLVWSDG
SAHRMSKKLRRN
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgatttctaagcacagactacttttcttcttctccggtcgataccctaagc
ttcctaaatcttccagtccctcacttagatcctcctcctcctccggagcaagaactgcat
cgtctccttcgcttcttccatcctcttgaaacgctctctctcccgatcgaaagaccccct
atcgattccgctctctccaaattcatctcctcagtccttcctcatttcatcgactttgat
tttcgtgatttcttacctgatcgatttcatcagttggtgttcaatttgcagaaggaagag
gagatagagagaggttttggaactgattcagctcaagagaaagataatgggaacaataaa
cattcggagaggcttgaagttatacaattggaagcaccagagcttgatacattcttggag
aatgtgtgcttctctgacgaagggatgcaactcctctctgaagtttctgagattgagaat
gattcggatctgctcaggcctgagattgaaatgcaatatcctgaaaaagttcgagaatca
gtttattctgttgaagatgtcactttagagtttgacatagatgaaaaagcttgtgcgctg
gaatatgatggttctgttcaggagcaagcacactttcatcataacacattccctctttta
gaagttgaagagatgagtcttcgaactttcacaaacccatccatggaagatgagtttctt
ttatttcttgagcatgttgagtccaaatggggtcaagaaaatatcctgcatattgacggg
aaagagctattgggttcgatgcagtttgatatcttagaatttctttcaaagcattgtcca
gaaaagcaatgccttgaacctgagctggcttctctagatacatccctgggaatggacatt
ataagcatggtggaaattccacatggtcgtgaagactctgcagattgtctttcaccaatg
aacccagttatttttcaggaattcaaattccttgagacggattcatctcaactttacgaa
gtcttctttgaaatgcaatcaacagatgaaccacaaacatgtgactcgatgttcagagaa
gatatgaattttaagaattttgatgaattgattgttagttgtgaactaacactggaagat
gacacattcaaatctctgcctatacctattttttctgatcctgacaagttaagttcgatc
tatgccattatggaggaaaaactagctgaactcaagccacaacccctatctgcatcccat
gggatttatttggattggcatctcttggaggaggataattacaacggtaaaaattcatcc
atatatcaaaaaatgttggaggagttggattcacacaacattgattttgatagggaatcc
tttgatggtggaaagttggtgattgaccttgttttctctgataatggtttgagtggggca
caaatggaagaacataaggaactgttgaatgtgacttctgaaactcccaacagtggactt
gtggaaggtgcttcaagtgagtctttggatagacgtcaagaaacaggaaatagagaaaca
ttaattggagaaaatgccgggaaggcttcattgttgttcaattctatgtcgcaattcaat
gatcttgattatttcttgaatcctgggaaagctactgctaggggaaaaaatgaatctaca
gtcaagattcctgatactagggcttcatttcccaagggaagcaaatctcattcagttcct
ggtatgaatgagaatatcaacgaccagaaattggaggaactgttaaatcttgcacctatt
gaggacaagtttaacatgacatcttcagaagctgcagataaagctgaagcttgcagcatc
cctttgcaagttccttatgcaacaaaaactgagaagactcagggggacatgatttatttc
cctgacatcgtcattattgtgaatactcaaaattttgacaaggaaatgatagtatccaga
agaagtacataccaaagaattcttgcgatggagaaagaaggagcacaagttgtggagcgt
gacttgaatctgcctgttgacgtgattattagttcttccatttgcctagtgtggtatgat
tgtggaaatattggaaagaaagcaactgctgcagatgaagcttcttcatgcttgcctctg
tgcattgagaatattgctgcaaatgttttgacattgctgagtttcgctttcagtggctgc
attctggtctttgagggagaaaccagattcctctctactgtaatggaattctctgatgga
ctctacgcagctgcagcaagcctgggaattgacctacagctcttttcttcctattcagct
gaattgaccgatgaaattatattgaacagtattttgtatgccaccaaatcttccaggggc
agatatcctaaaatgcctgaatcagaaactcttgcagaatccttccttaccaaatttcca
tcaattaatccactgacagcacatgcaattctgtcttctggaggcatgcttattgagttt
cttgaatggtcacatgaacgcaggatcctcgcagtccaacagtatcatgttccagttgaa
agtgttgctctgtttagtgctttgtgcaaatatggtgagcgggaggattctagatccata
atgacagactgttcctcctctgcatcttcttgtcctgactcagataaacctcatcttcat
attgattctgaaagaaaacgaagaaaatgcataaatagccttcaaaaaattgacattcaa
gtggatgacatgtggaaatctaaatcactgaaccaattcactgatggtatgctggatcct
ggagtgtttaagcaatatgattgttggacttcaacagatcccgagatgcttggcgagttg
aagcaacctagttcatctttgaaagatttgtttggtcaaaagcaggtgccggatattgct
ccggtgatggattttcctacttccatgaaaccactttattctggaaacttcaaagatcct
ctgattcgggatgacataagacagcccaggttaccactgaacgatatatttgtgggtcaa
aatcgggcatccgaaataaatatgaagaaggagttgaagttagacagtggtaatccctgt
aaatctaacgctaacaacctgcatgagtactttagaggtgaagtcatagacctcactgat
gatcccgtctcgttggagaaagacgttgcgtctattgctaactctacatatttctcacct
tggatgcctgatatcgaacaagattctgcaagaaagtcgaaagctgcaagacgactgtca
tttggtaagaatagtcaccctaataatccaacggctgctgagaaaaactcttgtccagat
ttatggacccctatagaaaatgatagacaaaggttaccacaaaatcgtggtgatccaatt
atggatgataagcatgaaaaagtgcctgtaaaacgcaggaaaaatctcttagaggaggct
tttacactgagagctgcaggaaaatccactaggtttccatttgaagaggagatatcacat
tgcggtggaagtggaacaccactttctaaagccatccattctgctcatccacaaccaggt
tcaccctggacaatagagtttcttaacagagtaagggaaaagagcagattgcggcagcag
tcccttccacctgatacatgtactccagatttttggaattcaggaaatatatcaaaggct
actgagagaagaagcctgtctattcttgattttttcaagtaccaggggggaagcactcct
agaaaagtatatgatcagaagaagcagaaacaacctattcaattgtcacgttcatcccag
aaggaaagaacttccgcatccctaattccaacatggacacccaaggataagagatcaaaa
cagactttatcctttgcaatggatggtggaaaccaaactaggctggtctggagtgatgga
agtgcccaccgtatgagcaaaaagctcaggagaaattga
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