Populus nigra (Lombardy poplar): 133678518
Help
Entry
133678518 CDS
T10372
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133678518
03036 Chromosome and associated proteins [BR:
pnz03036
]
133678518
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133678518
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
Helicases
133678518
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133678518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
133678518
NCBI-ProteinID:
XP_061956816
LinkDB
All DBs
Position
18:13032949..13038538
Genome browser
AA seq
686 aa
AA seq
DB search
MPSLSLTSNNSSVDPKKEKKMKKKIVLETQETDPLMVSSKKEKKKEKRKAVEFDDDDEER
SETSSELGEPVNLKKKSKKAKVVEEEEDGEEVKAEDPNAVTRFRISEPLREALKKRGIEA
LFPIQARTFEDILNGCDLVGRARTGQGKTLAFVLPILESLVNGPAKASRKTGYGRPPSVL
VLLPTRELATQVFEDFKVYGGAVGLNSCCVYGGASYQPQEFALKRGVDIVVGTPGRIKDH
IEKGNIDLSLLKFRVLDESDEMLRMGFVEDVELILGKVEDVRKVQTLLFSATLPDWVKNI
SSRFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTAAMPQVIPDVISCYGSGGRTIIFTE
KRESANELAGLLPGARALHGEIQQSKREVTLSGFRSGKFLTLVATNVAARGLDINDVQLI
IQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNISKIQRESGVKFEHITAPRAED
IAKAAGVGAAETITQVSDSVIPAFKSAAENLLSTSGLSAVELLAKALAKATGYTEIKSRS
LLTSMDNHVTLLLESGKPIYTPSFAFSVMRRILPEDKVESVTGMSLTADGNGAVFDVKKE
DVDTFLAAQENAAGVNIEVVKALPSLQERDRPRGRFGGGGGRGRGGFGDRSGGNRFSGGR
GGRGGGFSDRRNGSGGFQGRNNGNKW
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttatctcttactagcaacaacagctccgtggatcccaagaaagaaaagaag
atgaagaagaaaatagttcttgagacccaagaaactgatcctttgatggtttctagcaag
aaagagaagaagaaagagaagagaaaagctgtagaatttgatgatgatgatgaggagagg
agtgaaaccagctcagagcttggtgagcctgtgaatttgaagaagaaaagcaagaaagct
aaggttgttgaagaggaggaagatggagaggaggttaaagctgaggatcctaatgcagtt
accaggtttaggatatctgaaccgttgagggaagcgttgaagaagagagggattgaggct
ttgtttcctattcaagctaggacttttgaggatattcttaatgggtgtgatttggttggc
cgagcaaggaccgggcagggtaaaacattggcttttgttttgccaattttggagtcgcta
gtaaacgggcctgcaaaagcatcaaggaagacaggctatggaaggccaccaagtgttttg
gttcttttacctaccagggaactggccactcaggtgtttgaagatttcaaagtttatggt
ggagcagtgggcttgaattcttgctgtgtatatggaggagcttcataccagcctcaagaa
tttgccttgaagagaggggtggatatagttgtgggaacacctggccgcataaaggatcac
atagagaagggcaacattgacttaagcttattaaagtttcgggtccttgatgagtctgat
gaaatgctgaggatgggttttgttgaagatgttgaacttattctaggaaaggtagaggat
gtaagaaaagttcaaacacttctattcagtgccaccttgccagattgggtgaaaaatatt
tcttctaggtttctcaagccaactaagaaaactattgatcttgttggtaatgagaaaatg
aaagccagcaccaatgtaaggcatattgtacttccctgttctactgctgccatgcctcag
gttattcctgatgtcataagttgttatggcagcggaggccgtacaattattttcacagag
aaaagggaatccgcaaatgaacttgctggattattgcctggagcacgggctttacatggg
gaaatacagcagtctaaacgtgaggtgaccctttctgggttcaggtctggcaaattcctg
accttggtggctacaaatgtggctgcaagaggattggatatcaatgatgtgcagttaatc
atccagtgtgaacctccaaatgatgtagaagcttatatacatcggtctggacgtactgga
cgagcaggcaatagtggtgttgctgtgatgctctatgatccaagaaggtcaaatatatct
aagattcaaagagaatcaggtgtcaaatttgagcatataactgccccccgggctgaggat
attgccaaagcagctggcgtgggagctgcagaaacaataactcaggtttctgacagtgta
attccagcattcaaatctgcagcagagaatctgttgagtacctcaggtttgtcagctgta
gaactacttgcaaaagcacttgccaaggctactggttatactgagatcaagagtaggtca
ctgctaacttccatggacaaccatgtcactttacttcttgaatctggcaaacccatttac
actccatcatttgcttttagtgtcatgaggagaatcttgcctgaggataaggttgagtca
gtgacgggcatgagcctcacagccgatggaaatggtgcagtttttgatgtcaagaaagaa
gacgttgatactttcctagctgctcaggaaaatgctgctggtgtgaacatagaggtggtt
aaagcattgccttctttgcaagaaagagaccgaccaaggggtagatttggtggtggtggt
ggtcgtggtagaggtggttttggtgataggagtggtggtaataggttctcagggggaaga
ggtggcaggggtggtgggttctcagacagaagaaatggctctggtggctttcaaggtcgc
aacaatgggaacaagtggtga
DBGET
integrated database retrieval system
