Populus nigra (Lombardy poplar): 133678528
Help
Entry
133678528 CDS
T10372
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133678528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133678528
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133678528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
AIR2-like_ZnK4
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
133678528
NCBI-ProteinID:
XP_061956838
LinkDB
All DBs
Position
18:complement(2766078..2780735)
Genome browser
AA seq
769 aa
AA seq
DB search
MADHEKDDVSMLSDTHPKLVDEEVDSRFSPFLSRTQSASISIPVNSMESYGFETNLVGYT
GPLRSERKAPLVQMSGPLYINRNTENLFLANHGVTAHKKVEPKPERYLSFKGMDPNDWDD
MYTTTNAHLMRSGQLGMCNDPYCTTCPSNYHSKDSRFHSVLYGDAKGWARRFNDVINLYI
PRVMNPHAQVVQKWNKFFVISCWVAIFIDPLFFFLLWVQRENNCIVIDWPLTKTIVVFRS
LTDLIYLLNILLQFRLAYVAPESRVVGAGELVDHPKKIAKHYLRGYFFIDLFAVLPLPQI
IVLVVLPKGLGISGANNAKNLLRAAILVQYIPRLWRFIPLLIGQSPSGFIFETALANFFI
NLFTYILSGHIIGSCWYLFGLQRVNQCLRDACHYTGFRDECMKFIDCGGGNANEEYGSHS
KWANWKQNPNASNCFQTGGSPNGFDYGIYTKAVNLTGKNIIIRYIYSLFWGFQQISTLAG
NQVPSYFVWEVLFTMAIIGLGLLLFAFLIGNIQNFLQSLGRRRSEMSLRRRDVEQWMRHR
RLPQELRRRVLEAERYHWAATRGVNEGMLMENLPEDLQRDIRRHLFELLKKVWIFNLMDD
HVLDAVREKLKQKIYIKGSEIFYVGGLVEKMVFIVRGKLESIGHDGTVVALGEGNVCGEE
LLTWFLEHSSVFKDGRRIKTPGQRLISSRTVRCLTNVEAFSLSAADLQEVTSVFERNLRH
PLVQGAIRYQSPYWRARAATLIQVAWRYRQKRLKHSKNSQSHHSSNSRV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccatgaaaaagatgatgtatcaatgctgtcagacactcatccaaagttagtg
gatgaagaggtggattctcgattttcgccatttctttccaggactcaaagtgcatcaatt
tctattcctgtgaattccatggagtcctatggttttgaaaccaatcttgttggctatact
ggtccactgcgtagtgaaagaaaagctccactggtacaaatgagcggtcctctatatatc
aaccgcaacactgaaaacctattcctggcaaatcatggtgtaacagctcacaaaaaggtg
gaacccaagccagaaagatatctatcttttaaaggaatggatccgaatgactgggatgac
atgtatactactacaaatgcccacttaatgaggtctgggcaactagggatgtgcaatgat
ccttactgcacaacatgcccatcgaattaccattccaaagattccaggtttcatagtgtt
ctctatggagatgctaaaggttgggcaaggagattcaatgatgttataaacttgtatatt
cctagagttatgaatcctcatgctcaagtggttcagaagtggaacaaattttttgtcatt
tcatgctgggtggcgattttcatcgatcccttgtttttcttcctactatgggtgcaacgg
gaaaacaattgcatagttattgactggccattgactaaaacaattgtggtttttaggagc
ttgactgatctcatctacttactgaacatacttcttcagtttaggttagcttatgttgct
cctgaatctagagtggttggtgcaggagagttagttgaccatccaaagaaaattgctaag
cactacctccgaggatatttctttattgacttatttgcggtattaccactcccgcagatc
attgtattagtagtcctaccaaagggattgggaatctctggagcaaataatgccaaaaat
cttctacgggcagctattcttgtccagtacattccaaggctgtggaggtttattcctctt
ctcattggtcagtctccaagtggcttcatatttgagacagcattggcaaacttctttata
aatcttttcacctatatactgtctggtcacatcattgggtcatgttggtatctctttggg
ttgcagagggttaatcaatgtcttcgtgatgcctgtcattatactggttttcgagacgaa
tgcatgaaatttatagattgtggaggcgggaatgctaatgaagaatacgggtctcattca
aaatgggctaactggaaacagaatcccaatgcaagtaattgttttcaaacgggtggttcg
ccaaatggttttgattatggaatctataccaaagcagtcaaccttaccggaaaaaatatc
atcatcagatacatatattcattgttttggggattccagcaaatcagtactcttgctgga
aaccaagtaccgagctattttgtttgggaagtcctctttaccatggcaatcattggactt
ggcctcttgctctttgcttttctcataggaaacatacagaactttctccaatctcttggt
cggaggaggtcagaaatgtcgttaagacgacgtgacgttgagcagtggatgagacatcgg
cggttgccacaagaactaagaaggagagtgttagaagctgaacggtatcattgggctgct
actagaggtgtaaatgagggaatgcttatggagaatttgccggaagaccttcagagggat
ataagaaggcatctcttcgaacttctcaagaaagtttggatttttaacctgatggatgac
catgtcttagatgctgtccgtgagaaattaaaacaaaaaatatacatcaagggaagtgag
attttttatgttggtggactggttgagaagatggtttttatcgtgcgaggaaaattggaa
agcatcggtcatgatggcactgtagtagccttaggcgaagggaatgtttgtggtgaggaa
cttctcacatggtttcttgagcatagctcagtgttcaaagatggaaggagaatcaaaact
cccggacagcgtttgattagtagcaggacagtaaggtgcctaacaaatgtagaagcattt
tcactcagtgccgcagaccttcaagaagtcaccagcgtttttgaaagaaacttgcgccat
ccactcgtccaaggagccataaggtatcaatctccatactggagagcccgtgctgctacc
ctcattcaagttgcctggagatatcggcagaaacgtctgaagcatagcaagaactctcaa
tcacaccattcttcaaactcgagggtttag
DBGET
integrated database retrieval system
