KEGG   Populus nigra (Lombardy poplar): 133678573
Entry
133678573         CDS       T10372                                 
Name
(RefSeq) zinc finger protein BRUTUS isoform X1
  KO
K16276  zinc finger protein-like protein
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133678573
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133678573
SSDB
Motif
Pfam: Hemerythrin zinc_ribbon_6 zf-CHY zf-RING_2 zf-C3HC4_2 Lenti_VIF_2
Other DBs
NCBI-GeneID: 133678573
NCBI-ProteinID: XP_061956912
LinkDB
Position
18:4530489..4539746
AA seq 1241 aa
MATSLPEIQQCGEGVVLSKSAKRVDSKGGLESEEEDTKSPILIFLYFHKAIRNELDTLHL
LTLAFATGHQTVEIKPFFQRYRFLRLVYKYHSNAEDEVIFPALDNRVKNVANSYSLEHKG
ESNLFDQLFELLNSYTQNDESFPRELASCTGVLQTSLSQHMAKEEQQVFPLLIEKFSVEE
QASLIWQFICSIPVNMLAEFLPWLSSSISPVEYQDMLKCLSMIIPKEKLLQQVIFTWMEG
KKSTDAVESYVDNHEVLSQKDSPTSMLILELDKEKCTCKKSKTGKRKYLEPSNEDSDTME
THPIDEILLWHNAIKRELNEIADEAKKIQSSGDFTNLSAFDERLQFIAEVCIFHSIAEDK
VIFPAVGGEFSFSKEHAEEENQFNEFRCLIESIQSAGASSNSVADFYAKLCSHADQIIET
IQRHFHNEEIQVLPLARKHFSFRKQKELLYQSLCMMPLKVIERVLPWLVGLLTEHEARNF
LKNMQSAAPAVDTALVTLFTGWACKGRSQGVCLSSSVIRCCPADIEEKFVPSCCARLCAF
CSKDSPVSISEGIKRPQKRNISGSCKNSNICNPIEILDAHEPTCSDRSCCVPGLGVNSKN
LGLTSLSTTKSLRSLSVKSSAPALNSSLFVWEADMVSSDLGYTERPIDTIFKFHKAISKD
LEYLDVESGNLSDCDEAFLQQFIGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHS
YTLDHKQEEELFEDISFVLSELSHLHENLQKFQVMEDPSGSTLEHSIGHLDDYMGKYNEL
ATKIQWMCKSIRVTLDQHINREELELWPLFDRHFSIQEQDRLVGCIIGTTGAEVLQSMLP
WVTSALTQDEQNKMMDTWKQATRNTMFNEWLNECWKETSASLVQTEPSGDTIYKEEGREF
QESLDQSDLFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKSYLVQNLLTSRWIAAQQ
KSPQETAGENSTAADVMGCFPTFRDPEKQVYGCEHYKRNCKLRASCCGKLFACRFCHDKV
SDHTMDRKATLEMMCMRCLKVQPVGQICATPTCNGLSMAKYYCNICKFFDDERSVYHCPF
CNLCRVGKGLGIDFFHCMTCNCCLGIKLVNHKCLEKGLETNCPICCDFLFTSSATVRALP
CGHYMHSSCFQAYTCSHYTCPICCKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCN
DCDQKGSAQFHWLYHKCGFCGSYNTRVIKNEVTHPNCTTRL
NT seq 3726 nt   +upstreamnt  +downstreamnt
atggcgacgtcgttaccggaaatacagcagtgtggagagggagtagttttgtcaaaatcg
gcgaagagagtggattcgaaaggtggtttagaaagcgaagaagaagacacgaagtcgccg
attttgatatttttgtactttcataaggcgattcggaatgagcttgacacgcttcaccta
ttaaccctggcttttgctaccggtcatcagactgtggagattaaaccgttctttcaacgt
taccggtttctccgcttggtttataagtatcactctaatgctgaagatgaggtcatcttt
ccagctcttgataatcgtgtgaagaatgtggcaaactcgtattcattagaacacaagggt
gaaagcaatcttttcgatcaattatttgagcttctaaattcttacactcaaaatgatgaa
agttttccacgtgagttagcatcctgtaccggcgtccttcagacatcacttagtcagcat
atggccaaggaagagcagcaggtttttcccttgcttattgagaagttctcagtcgaagag
caggcatctctaatctggcagtttatatgcagcattcctgttaacatgttggctgagttt
ctgccctggctttcatcctctatttcaccagttgaataccaagacatgctcaagtgccta
agcatgataattccaaaggaaaagcttctgcaacaggttattttcacctggatggaaggg
aagaagagcacagatgcagttgaaagttatgtagataatcatgaggttttaagccagaag
gattctcctactagcatgttaattttggaactggataaagaaaaatgtacctgtaagaaa
tccaagactgggaaaaggaaatatttggagccaagtaatgaggattctgataccatggaa
acacatccaatagatgaaattcttctttggcataatgctattaagagggagttaaatgaa
atagctgacgaggctaagaagatacaaagctctggagattttactaatttatcagcattt
gatgagcggctgcaattcattgctgaagtttgcatcttccacagtattgctgaggacaaa
gtcatatttcctgctgtaggtggagaattttcattttcaaaagagcatgcagaagaagaa
aatcaatttaacgagttcagatgtttaattgaaagcattcaaagtgcaggtgcaagctct
aactctgtagctgatttttatgcaaagctatgctcgcatgctgatcaaataatagaaact
atacaaaggcacttccacaatgaggaaatacaggttctcccacttgcccgtaagcacttt
agcttcagaaaacagaaggaacttttataccagagcttgtgcatgatgcctttgaaagtg
attgagcgggtcttgccatggctggtggggttattaacagaacatgaggccaggaatttc
ctaaaaaatatgcaatcagcagctccagcagtagacacagctcttgtaactctttttact
ggttgggcatgcaagggtcgtagccaaggtgtgtgcttgtcttcaagtgtaattcgttgc
tgtcctgctgatattgaggaaaaatttgttccatcatgctgtgcgcgtttgtgtgccttt
tgttcaaaggatagtcctgtttcaatcagtgaaggtatcaaaaggccacaaaaaagaaac
atctcaggatcttgcaaaaatagcaatatctgcaaccccatagagattctggatgcccat
gaaccaacttgttctgataggtcttgttgtgtcccaggtttgggagtaaacagcaaaaat
ctgggattgacttctctttccaccaccaagtctttgcgatctttatctgtcaaatcctct
gctccagcccttaactccagtctttttgtctgggaagcagatatggtctcttctgatttg
gggtatacagaacgaccgatagatactatttttaaatttcataaagccataagcaaagac
ttagagtatcttgatgtcgaatctggaaacctcagtgattgcgatgaggcatttcttcag
cagttcattggaagattccgtctattatggggcttatacagagctcatagcaatgctgag
gatgaaattgtttttccagcattagagtctaaagaggcacttcataatgttagccattct
tatacactagaccataagcaggaggaagaattatttgaagacatttcatttgtcctttct
gagctttcacaccttcatgaaaatttgcaaaagtttcaagtgatggaggacccatcagga
agtactctggagcattctattggccatctcgatgattatatgggaaagtataatgagcta
gccaccaagattcaatggatgtgcaaatctataagagttactttagatcaacatattaat
agagaagagcttgagttgtggccattgtttgacaggcatttttcaattcaggagcaagac
aggttagttggttgcataattgggaccacgggggctgaagtactgcaatctatgttgcct
tgggttacttctgccctgactcaagatgaacaaaataaaatgatggacacatggaaacag
gcaacaagaaacacaatgtttaatgagtggcttaatgaatgctggaaagaaacttcagca
tcacttgtgcagactgaaccatcaggagatacaatttataaagaagaaggcagagagttt
caagaaagtttagaccaaagtgatctgtttaaacctgggtggaaagatatcttccgcatg
aatcaaaatgagcttgaatctgagattagaaaggtttatagggactcgactcttgatcct
aggagaaaatcatatcttgttcaaaatcttctaacaagccgctggatagctgctcaacaa
aagtcacctcaagaaactgcaggggaaaattctactgctgctgatgtaatgggatgcttc
ccaacatttcgagaccctgaaaaacaagtatatgggtgtgaacactacaagagaaactgt
aaacttcgtgcttcttgctgtggtaaactgtttgcttgcagattttgccatgacaaagtt
agtgatcacacgatggacagaaaagcaacattggaaatgatgtgcatgcgctgcctgaag
gtccaaccagtagggcaaatctgtgcaacaccaacatgcaatggtctttcaatggcgaaa
tattattgcaacatatgcaagttttttgatgatgaaaggagtgtatatcattgcccattt
tgcaatttatgccgtgttgggaagggtcttggtattgatttctttcattgcatgacttgc
aactgttgtctggggattaagttagtgaaccacaagtgcctggagaaaggtttagaaact
aactgccccatttgctgtgattttttattcacatcaagtgcaacagtcagagctttacct
tgtggccattatatgcattcctcatgctttcaggcatatacttgcagtcactatacttgt
ccaatatgctgcaaatccttgggagatatggcggtttattttggcatgcttgatgcgttg
ttggctgccgaggagctgccagaggaatacagggatcgttgtcaggatatactgtgcaat
gattgtgatcaaaaggggtctgcacaattccactggttatatcataagtgtggattctgt
gggtcttataacacccgggtaatcaagaatgaggtgacccatcccaactgcaccactcgt
ctctga

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