Populus nigra (Lombardy poplar): 133678662
Help
Entry
133678662 CDS
T10372
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133678662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133678662
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133678662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
DUF4854
Motif
Other DBs
NCBI-GeneID:
133678662
NCBI-ProteinID:
XP_061957062
LinkDB
All DBs
Position
18:complement(1818068..1826940)
Genome browser
AA seq
709 aa
AA seq
DB search
MNHPQEKFVRFQDWKSEKSTEGNYSASNVMYPGKIRTTISSVSEKFQRGLESGSSSFNKI
RKSLKSYSFNSEVASRKKILDPQGHFLQKWNKIFVLSCLIAVSLDPLFFYVPVIDDGKKC
LSLDRTMEITASVLRSFTDIFYMLHIIFQFRTGFIAPSSRVFGRGVLVEDTWAIAKRYLS
SYFLIDILAVLPLPQVVILIIIPKMAGSRYLNTKNVLKFVVIFQYVPRFMRIYPLYKEVT
TSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETNCWRQACGKQDGCRRGLLFC
DREGGVENLSFLDNYCPITTPNETVFNFGIFLDALQSGVVSSSMDFPQKFFYCFWWGLQN
LSSLGQNLKTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRIKRRDAE
QWMSHRLLPDNIRERIRRYEQYRWQETRGVDEEMLVHNLPKDLRRDIKRHLCLALLMRVP
MFEKMDEQLLDALCDRLKPVLYTEESYIVREGDPVDEMLFVMRGKLLTITTNGGRTGFFN
SEYLKAGDFCGEELLTWALDPQSSSNLPISTRTVRTITEVEAFALMADDLKFVASQFRRL
HSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLRQEENRLQDALAKANESSPS
LGATIYASRFAANILRALRRGGNRKARVPDRVPPMLLQKPAEPDFTSEE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatccacaagagaagtttgtgaggtttcaagattggaaatcagagaaaagtact
gaagggaattattctgcaagtaatgttatgtatccaggaaaaattagaaccacaataagc
tcagtttctgagaagtttcaaagaggattggaatctggctcttcaagctttaacaagatt
agaaaatcattaaaatcatattcattcaacagtgaggttgcttcaagaaagaaaattctt
gacccacaagggcatttccttcaaaagtggaacaagatattcgtattgtcatgcttgatt
gctgtttcactggatcctttgtttttctatgtccctgtgattgatgatggtaagaagtgt
ctttctttggaccgcacgatggagattacagcaagtgttttgcgttctttcacggatatc
ttttatatgctacatattatctttcaatttcgcactggattcattgctccctcatcccgg
gtatttggaagaggtgttttggtcgaggatacttgggcaatagctaagagatatctgtca
tcatatttcttaattgacattctcgcagttcttccactcccgcaggtggtgattttaatt
atcattccaaaaatggccggctcaagatacttgaatacaaagaatgtgttaaaatttgtt
gtcatcttccagtatgttccaaggtttatgcgaatttatccattatataaggaagttaca
acttctggcatccttacagaaactgcatgggctggagctgcatttaatctttttctgtat
atgcttgcgagtcatgtacttggagccttttggtatttgttttcaatagaacgagaaaca
aattgttggagacaagcctgtgggaaacaagatggatgcaggcgtggacttttgttttgt
gacagagaaggtggtgttgaaaatctctcatttctggataattattgcccgataacaacc
ccaaatgaaacagtcttcaattttggaatattccttgatgcccttcagtctggtgttgtt
tcgtcatccatggattttccacagaagttcttttactgtttttggtggggcctgcaaaac
ctgagttctcttggtcaaaatcttaaaacaagtacctacgtttgggaaatctgctttgca
gttttcatttctatctccggcttggtactattttcatttctcattggaaatatgcagact
tatttgcaatccacaactacaagattggaggaaatgagaatcaaaagaagagatgcagaa
cagtggatgtcccatcgcttgcttcctgataatataagggaacggatcagacggtatgaa
caatacagatggcaagaaactagaggtgttgatgaagagatgcttgttcataatcttccc
aaggaccttagaagggacattaaacgtcacctctgcttggctctgctcatgagagtgccg
atgtttgaaaaaatggacgaacaattactagatgcattgtgtgaccgtctcaagccagtc
ctatacacagaggagagctacattgttcgtgagggagacccagttgatgaaatgctcttt
gttatgcggggcaagctattaaccataaccaccaatggtggaagaactggcttcttcaac
tctgagtaccttaaggccggtgacttctgtggagaggaacttctcacatgggctttagat
ccccaatcctcttctaatctgcccatctcaactagaacagttagaaccattacagaagtt
gaagccttcgctctaatggctgatgacttgaaatttgttgcttctcaattccggcggctt
cacagtaagcagctccgacacactttcaggttttactcgcagcagtggagaacatgggct
gcttgttttatacaggctgcatggcgtcgctatagtaaaaagaagctcgaagagtctctc
cggcaagaggaaaatagattgcaagatgcattagccaaagctaacgagagttcaccaagt
ttaggtgctacaatatatgcctcaagattcgctgctaacattttgcgtgctctacgacgc
ggtggcaatcgcaaggcaagggtgccagatagagttccacccatgctgctgcagaagcca
gcagagcctgattttacttctgaagaatga
DBGET
integrated database retrieval system
