Populus nigra (Lombardy poplar): 133678692
Help
Entry
133678692 CDS
T10372
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133678692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133678692
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
SR proteins
133678692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
133678692
NCBI-ProteinID:
XP_061957124
LinkDB
All DBs
Position
18:686234..690927
Genome browser
AA seq
280 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGRLGISRHSE
FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLDD
TEFKNPWARAYIRVKQYEGSPSRSRSRGRSRSRSRSRSRSRSRSPRRNRSKSLERSVSRS
RSRSRSRSKTRSASPLKASRPKSRSRSRSESPTKARSGSA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgtacaatctacgttggcaacttacctgcagatataagagaa
tcgaaagttgaagatctgttttacaagtatggccgtatcctggatgttgaattgaagatt
ccacctcggcccccttgttattgttttgtcgagtttgaaaatgctcgggatgctgaagat
gcaataaggggccgtgatggctataactttgacggttctcgtttaagggttgagcttgcc
catggtggtagaggaccatcgtcaaatgatcgtcgtggtgggtatggtggtggtggtgga
ggtggaggaggaggaggaggtggaggtgggggtcgacttggcatctcacgccattctgaa
tttcgagttattgttcgtggtcttccttcgtctgcttcctggcaagatttgaaggatcat
atgcggaaagcaggagatgtgtgttttgctgaagttacccgtgatggtgatggaacttta
ggccttgttgattatacaaatcatgaagacatgaaatatgccattcggaaacttgatgat
actgagtttaaaaatccctgggccagagcttatattcgggtgaagcaatatgagggctct
ccatcaaggagccggagccgtggtcggagcaggagcaggagcaggagcagaagcagaagc
aggagccgaagtccgaggaggaaccggagcaaatcattggaacgatctgtttcaaggtcg
aggtcaaggtcaaggtcaaggtcaaaaactagatctgcttcacctctcaaagcatccaga
ccaaaatcaaggtccaggtcgaggtctgaatctcccaccaaggcacggtcaggcagtgcc
tga
DBGET
integrated database retrieval system
