Populus nigra (Lombardy poplar): 133678705
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Entry
133678705 CDS
T10372
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
pnz Populus nigra (Lombardy poplar)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
133678705
NCBI-ProteinID:
XP_061957143
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Position
18:12005174..12016685
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AA seq
1114 aa
AA seq
DB search
MSKENSYALAKIITEEQRARISHNFKAAKALLARKRPLDSIAAATANKFPHKNNDVISLK
SPRFPLAEVNTNLPPSRLVQKGVTRVSELVNGSDGESKCLSESFVTPVKKPEGSGFSDCL
STLSSSASILDDDNFNESILEEIDAICEQKSVVKMEKDSPNRSFSVECECDQGNEGSLAS
LESGMRDVLDSPTEEKSICPCGNMPEEYVKYLQGLNDRQREAACSDISVPLMLIAGPGSG
KTSTMVGRVLMLLNEGISPSNILAMTFTTAAAAEMRDRIGAVAGKAKAKELMISTFHSFS
LQLCRSHAEKLGRTSEFLIYGHGHQRRAIIEAVRLLEKEKSGVQNDDASKLAQDSKDIVS
PEYFKERSKKWQKFVTQAKASGKTPADFHRRGDEIGAAILGNYNDILRSCNALDYHDLIS
CSVTLLTDFPEVFEDCKDSWKAIVVDEFQDTSAMQYSLLRLLSSHNHITIVGDDDQSIFS
FNGAEISGFDSFRHDFANYKEIRLNKNYRSTRYIVEAASSLIQNNMKRCRFKDVLTDNSC
GSKIAIKECQNERAECAFVVDKILETASDGSHSKPSYGSIAILYRRQVSGKIFQLAFRER
KIPFNVHGVAFYRKKVVKAIIAMLRTTLPGCDDGSYHQVFKALLPFEKEEKKRVIEHVDK
ISTVRKCSFIAAACDVFSAKISGTFKRSQLTQGRKVLSTLQMISKLVHREQSISAVITSV
ASMVPQKYLLEQRAVVDSDGGKLLNEDNDLRSVLQYLLDDVSDVLSMQVASKEGEGDVQE
QKGCVSLLKEFIDYITQREKENFHSRRHNNENSVTLTTIHQSKGLEWDTVFIVKANESEI
PLLHEFNGTAKENGTSIEEERRLFYVAMTRARKKLFITYVAMDSNWQMLHPSRFLKEIPD
HLREIQAEVCLQDLQTKHREIRNETVDFVIDLPKEQKVSDLESESNDFLVNQMNEASKES
LETIDSYNGNIFLRRFAVEERSVVSHLFHQWAKKQAFQNPKRLLNKVGFVIDERLRVKKN
KHKDVLRALKSCLSCDEAFQYAEYVLRWEQIPADQRAHLMHEKQEHFQKLRIENSMSSSA
PTSKQIGYLQNLGCTVTPTSRLHASRLIEQYKSL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaaacagttacgcgttagccaaaatcataacggaagaacaaagagctcga
atttctcacaatttcaaagccgcaaaagcactcctcgctcgcaaacgccctctcgactcc
atcgccgccgcaaccgctaataaattccctcacaaaaataatgatgtaatctcacttaaa
tcaccaagatttcctctcgcggaggtgaatactaacctgccgccatcgcggttagtacaa
aaaggtgtcacgcgagtttcggagttggttaatggtagtgatggagagagtaaatgttta
tcggaatcttttgttactccggtgaaaaaaccggaaggttcgggttttagtgactgttta
tctacgcttagtagcagtgctagtattttagatgatgataattttaatgagtctattttg
gaggagattgatgcgatttgtgagcagaagtctgttgtgaaaatggaaaaggatagtccg
aataggagttttagtgtagaatgtgagtgtgatcagggaaatgagggcagtttggctagt
ttggagtcaggtatgcgagatgtgttggactctccaacggaagagaaaagtatttgtcca
tgcggaaatatgcctgaagagtatgtgaagtatttgcagggtctgaatgataggcagcgt
gaagcggcctgtagtgatatttcggttcctttgatgcttattgctggtccaggtagtgga
aagacttctacaatggtcgggcgtgttttgatgctgctcaatgagggaattagtccatca
aacattctggcaatgactttcacaactgctgcagctgctgagatgagagatcggattgga
gcagtggctgggaaggcaaaagctaaagagcttatgattagcacgttccattccttttct
ttgcaactttgtcgttcacatgcagagaaattaggccgcacatcagaattcttgatatat
ggacatgggcatcagagaagagcaatcattgaggctgtgaggctattagaaaaggaaaag
agtggtgtacaaaatgacgatgccagcaaacttgctcaagattctaaagatatagtgtct
ccggaatatttcaaggaaaggtcaaagaaatggcaaaagtttgtgactcaggctaaagcc
tctggaaaaacacctgcagacttccatagaaggggtgatgaaattggagcagcaattctt
gggaactacaatgacatattaagatcttgtaatgctttggactaccatgacttaatcagc
tgttctgtgacgttgctcactgattttcctgaagtatttgaggattgcaaagattcatgg
aaagccattgtggtagatgagttccaggacacaagtgccatgcaatacagtcttttacga
cttctttcatctcataatcatataactattgttggtgatgatgatcagtcaattttcagt
ttcaatggagctgaaatttctgggtttgactcatttcgtcatgattttgcaaattacaaa
gagattagactcaataaaaactatcgatccacccgctatattgttgaagctgcatcttct
cttattcaaaataacatgaaaagatgccggtttaaggatgttcttactgataattcttgc
ggatctaagatagctatcaaggaatgtcaaaatgaacgtgcagaatgtgcatttgttgtt
gacaagatcttggaaactgcatctgatggctcacattctaagccttcttatggcagtatt
gccattctgtataggaggcaggtatcaggaaagatatttcaattagcatttcgtgagagg
aaaataccattcaatgttcacggggttgctttttataggaaaaaggtagttaaagctatc
attgcaatgcttagaacaacattgccaggttgtgacgatggttcatatcatcaagttttc
aaggctttgcttcctttcgagaaggaggagaaaaagagggttatcgagcatgttgataaa
atctcaacggtccgaaaatgtagctttatagctgctgcatgtgatgtctttagtgcaaag
atttctggtaccttcaagaggagtcagctcacacagggacgtaaggtgctatctacacta
cagatgatttccaaacttgttcacagggaacagtcaatttcagctgtcataacttcagtg
gcaagcatggttcctcagaaatatcttctcgaacaacgggcagtggttgatagtgatgga
ggaaagttgctcaatgaagacaatgacctcagatctgttcttcagtatttattggacgat
gtctctgatgttttatccatgcaagttgcttcaaaagaaggagagggtgatgtgcaagaa
cagaaaggttgtgttagtttactcaaagagtttattgactacataacacagagggagaaa
gaaaattttcattctcgaagacataataatgaaaattctgtaaccctgactaccattcat
cagtcaaaaggcttagagtgggacactgtttttatagtaaaggcaaatgaatctgagatt
cctctgttgcatgaatttaatggcactgcaaaggaaaatgggacctcaattgaggaagag
cggcgtcttttctatgtggcaatgactcgtgctcgaaagaaacttttcattacatatgtt
gccatggattcaaattggcagatgcttcatccatcacgttttctcaaagagataccagat
catcttcgggagattcaggctgaagtatgtctacaagatttacaaacaaagcatcgcgag
atccgaaatgaaactgttgactttgtcattgatctaccaaaagaacaaaaagtttctgat
ttagaatcagagtcaaatgatttcctcgttaatcaaatgaacgaggcttctaaagagtca
ttggaaacaattgattcatacaatgggaatattttcttaaggagatttgctgttgaggaa
aggtcagttgtttcccacttattccatcaatgggccaagaaacaagcattccaaaaccct
aagagattgcttaataaggttggatttgttattgatgaacgattgagagtcaagaagaac
aaacacaaggatgttttgcgtgcattgaaatcctgcttgagctgtgatgaggcctttcag
tatgcagaatatgtgctgagatgggagcaaattcctgccgaccaacgtgctcatttgatg
catgagaaacaggagcatttccagaaattaaggatagagaattcaatgagctcatctgca
cccacatctaaacagattggatatcttcaaaacttgggatgcaccgtgacccctacatca
cgtctccatgcttcccgcttgatagagcaatataaatcattatga
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