Populus nigra (Lombardy poplar): 133678719
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Entry
133678719 CDS
T10372
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133678719
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
133678719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
Motif
Other DBs
NCBI-GeneID:
133678719
NCBI-ProteinID:
XP_061957167
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All DBs
Position
18:complement(5530477..5540022)
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AA seq
680 aa
AA seq
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MEAPQGGSERDKTISTSPVSLVSNFWKDFELEKEKSVLDEQGLRIAENQENSQKNRRKLA
ESTRDFKKASSDEKLGLFNSLLKGFQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPAL
ASISEQDLKLSELESESRKMKVELEEFRTEAAHLKNQQATIRRLEERNRQLEQQMEEKVK
EIVEMKQRSLAEENQKTLEVLKEREQSLQDQLRQAKESVATIQKLHELAQSQLFEVRAQS
EEEWAAKQSEVNFLMDEVERAQTRLHSLEREKGVLRSQLQSANEEIEDKKGDNSDSTSIL
ESSLSTKEKLISELNMELHNIETTLTNEREQHINEIKKLNILLNEKEAALEEMKKELQAK
PTEKLVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQLK
VKISEKATSLETAEGKITELTAKVNEQQKLIQKLEDDILKGYSSKDRKGSLFDAWDLSEA
GGVELSENADQKHVSLDQDQSSMLKVICNQRDRFRARLRETEEEVRQLKEKIGVLAADLE
KTKADNVKLYGKIRYVQDYNLEKVVSRGSKKHAEDLESGFASDVESKYKKIYEDDINPFA
AFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALS
YLSHGEAFDGDKKLDLPHAL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgcaaggaggatccgagagggacaaaacgatctccacttctcctgtctcc
ctcgtctccaatttctggaaagactttgagctggagaaggagaaaagtgtgttggatgag
caggggcttagaattgctgaaaatcaggaaaacagccagaaaaaccgacggaagcttgcc
gagagcaccagagatttcaagaaggcttcatccgacgaaaagttaggtttgtttaactca
ttgctaaaagggttccaggaagaagtcgataatcttactaagagagccaaatttggagaa
aatgcttttcttaatatctatcagaaactctatgaggctccagatccttatcctgctctt
gcttcaatttctgagcaagatctgaaattgtctgagttagagtctgagagccggaagatg
aaagttgagctagaggagttcaggactgaggcagctcacctaaagaatcagcaagcaaca
ataagaagacttgaagagcgcaaccgtcagttagagcagcagatggaggaaaaagtaaag
gaaattgtggagatgaagcaacgtagtttggctgaagagaaccagaaaacattagaggtt
ttaaaagaaagggagcaatcattgcaagatcaattacgacaagctaaagaaagcgttgca
actatacagaaattacatgaacttgcacaaagccaattgtttgaagttcgtgctcaatca
gaggaagaatgggcagcaaagcaatcagaggtcaattttctgatggatgaagtggaaagg
gcacaaacacgtctgcatagtcttgaaagggagaaaggtgtcctacgctctcagttgcaa
tcagcaaatgaagagattgaagataagaaaggtgacaattcagattcaactagcattctc
gagagttctttgagcaccaaagaaaagcttatctctgaacttaacatggaacttcacaac
attgaaaccacattgacaaatgagcgagaacaacacattaatgagatcaaaaaattgaat
attttacttaacgagaaggaagctgctctcgaggagatgaagaaagagcttcaagcaaaa
ccaactgaaaaattagttgatgatttgcgtaaaaaagtgaaaattttgcaggctgtaggt
tacaattcaattgaggctgaagattgggaagtagctacaagtggggaagagatgagcaaa
atggagtctcttcttcttgataaaaacagaaaaatggaacatgaactcacgcagttgaag
gtaaaaatctctgagaaagcgacttcactggaaacagctgaaggcaagataactgagctt
actgcaaaggttaatgaacaacaaaaattaatacaaaagttggaagatgatatattaaag
ggttatagctccaaagatcggaaaggcagtctatttgatgcttgggatctttcggaagca
gggggggttgagttatctgagaatgcagatcagaaacatgtttccttagatcaagatcag
agctcaatgcttaaggtgatctgcaatcagcgagatcgatttagggcacgtttgcgggag
accgaagaggaggtgaggcaattgaaggagaagataggggtgctagcagcagacttggag
aaaacaaaagctgataatgtcaagctatatggaaagatacgctatgtccaagattacaat
cttgagaaagtagtttctcgaggatcaaagaagcatgctgaggatctggaaagtggcttt
gcctcagatgttgaatctaagtacaagaagatatatgaagatgacataaatccattcgct
gctttttcaaagaaggagcgggatcaaagatacaaggagttgggtttcagggatagaatc
acgcttagtagtggacgctttcttctgggtaacaaatatgctcgaacttttgcatttttc
tatacaattgggttacatattctggtgttcacctgtctctatagaatgtcagctctgagc
tatctcagccacggtgaggccttcgatggtgataaaaagctggacctcccacatgcactc
tag
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