KEGG   Populus nigra (Lombardy poplar): 133678755
Entry
133678755         CDS       T10372                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133678755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133678755
   03041 Spliceosome [BR:pnz03041]
    133678755
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133678755
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133678755
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133678755
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_RdRP1_2 NID
Other DBs
NCBI-GeneID: 133678755
NCBI-ProteinID: XP_061957231
LinkDB
Position
1:30914191..30917561
AA seq 416 aa
MSMDYDYPLQERQYGDNVISFNGRDEDNRQQQRQEEGYYEEEEEQQQQEGEIGSGGIERN
QSMNHHYHHHNRDSSSAGKLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRG
FGFVTFADPVVADRILEEDHVIDGRAVEVKRTVPREDMEVKGVTRTKKIFVGGIPPSLTE
DELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQVEI
KKAEPKRTGGDHGNATKSYAGFRNGAGGFGAGGFGAGNSSAGRYGRKMGREYGGYSGYDG
YSGYGSYGGGYPSGSTAGFYGGYGAYGYGFGFGGPMMYGGGVYGGSGYGAPSAYNNAAEY
GGGKGYGRTGDGDSFGSGKRYGNGDAVSGVYGSTKGYGGSANGGAAVTGRFHPYRK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtcaatggattatgattatccacttcaagaaaggcaatatggagataacgtaatttcc
tttaatggccgtgacgaagacaatcgacaacagcagcggcaagaagaaggttattatgaa
gaagaagaagaacagcaacaacaggagggagaaataggtagtggagggattgagagaaat
cagtcaatgaatcatcactatcatcaccacaatcgtgactcttcatctgcaggaaaactc
tttgttggtggtgtctcctgggaaactactgaagaaacattcactaattactttagtaag
tatggagaagtcatggactctgtaataatgacggatagacattctggaaggccacgaggg
tttggctttgtaacatttgctgaccctgtagtagctgataggattttggaggaagaccat
gttatagatggaagagcggtggaggtgaagaggacagttccaagggaagatatggaggtt
aaaggagtaacaagaacaaaaaaaatttttgttggtggaataccaccatctttgactgaa
gatgaattaaaggaatacttctctgtttatggtagcattgttgaccaccagattatgcta
gatcataagactggaaggtctaggggatttgggtttgtcacatttgacagtgaagatgct
gttgaacgaatcttttcagagggcagaacacatgagcttggtggtaaacaggtggaaata
aagaaggctgaaccaaagagaactggtggtgatcatggcaatgcaacaaagtcttatgct
ggattcagaaatggtgctggcggttttggtgctggcggttttggtgctggcaatagttca
gcaggtcgttatggtcgaaaaatgggcagagaatatggtgggtacagtggctatgatggt
tatagtggttatggcagttatgggggaggctatccttctggaagcactgctggtttttat
ggtggttatggagcatatggttatggatttggatttggtgggccaatgatgtatggaggt
ggtgtatatggaggaagtggttatggtgctccaagtgcttacaacaatgcagctgagtat
ggtggtggtaaaggatatgggagaactggtgatggtgatagttttggcagtggtaaaaga
tatggtaatggtgatgccgttagtggtgtctatggcagtactaaggggtatggaggcagt
gcaaatggtggtgctgctgttactggaaggtttcatccctaccggaaatag

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