Populus nigra (Lombardy poplar): 133678771
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Entry
133678771 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133678771
04121 Ubiquitin system [BR:
pnz04121
]
133678771
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133678771
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133678771
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133678771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
zf-RING_5
zf-RING_10
zf-RING_16
zf-RING_Vps41
zf-Nse
zf-RING_6
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
133678771
NCBI-ProteinID:
XP_061957243
LinkDB
All DBs
Position
18:complement(2615475..2618598)
Genome browser
AA seq
344 aa
AA seq
DB search
MSSTGGVPQLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEEYESPNPSSNPVDSGLGPA
ILLDEFASIFGGMAPTPRSSNNSTTTNSSSASPLFQDPDGFNPFAFLQNYLQTMRAGGAN
IQFVIENNSGMGGMDTTGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVE
NLPDIKVTKELLESDSSQCAVCKDIFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCR
YELPTDDPDYEQRKGNGNDGGYQNAGGGNSGGGSFSDGDNSDGNAQTPRDRRFRIAFQWP
FSSGSGRSVGSSAGASNSGSGNNNDEDSRGNTNFGSETREEDLD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaccggcggcgtcccgcaactctacttctgttaccagtgcgaccgaaccgta
acaataactccgtcaccaacctccgatctctcatgtcctaactgtcaggaaggtttcctc
gaagaatatgaatctccaaaccctagctctaaccctgtcgattctggtctcggccccgcc
atcttactcgacgaattcgcctccatcttcggtggcatggcccccactcctcgatcatca
aacaactcaacaacaacaaactcttcttccgcgtcgccgctttttcaagatcccgacggc
ttcaatcctttcgcgttccttcaaaattacctccaaaccatgagagccggcggagcaaac
attcagtttgtgattgaaaataattctggtatgggtggaatggacaccacaggatttcgt
cttccggcgaatctcggagattattttatcggaccagggttagagcaactgatccaacag
cttgcggagaatgatcctaataggtatggaactccgccggcatcaaagtctgcggtggag
aatctccctgatattaaggtaacgaaggaattattggagtcggattcttcacagtgtgcg
gtttgtaaggatatttttgagctaggggaggaagcgaaacaaattccttgtaagcatatc
tatcataaggattgtattacaccttggcttgaattgcataattcgtgtccggtttgtcgg
tatgagttgcctactgatgatcctgattatgagcagaggaaagggaatgggaatgatggt
ggttatcagaatgcaggtggtgggaatagtggtggtgggtcttttagtgatggtgataat
agtgatggtaacgcacagactccaagagacaggaggtttaggattgcttttcagtggcct
tttagtagtggtagtggtaggtcggttggatcatcagcgggggctagcaatagtgggagt
gggaacaacaatgatgaggattcgagagggaataccaactttggatccgagactagagaa
gaggatcttgattga
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