KEGG   Populus nigra (Lombardy poplar): 133678866
Entry
133678866         CDS       T10372                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03083  Polycomb repressive complex
pnz04120  Ubiquitin mediated proteolysis
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133678866
   04120 Ubiquitin mediated proteolysis
    133678866
  09126 Chromosome
   03083 Polycomb repressive complex
    133678866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133678866
   04121 Ubiquitin system [BR:pnz04121]
    133678866
   03036 Chromosome and associated proteins [BR:pnz03036]
    133678866
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133678866
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133678866
   Cul7 complex
     133678866
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133678866
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133678866
SSDB
Motif
Pfam: Skp1 Skp1_POZ HTH_Tnp_IS630 CCDC74_C
Other DBs
NCBI-GeneID: 133678866
NCBI-ProteinID: XP_061957359
LinkDB
Position
18:complement(9992049..9992513)
AA seq 154 aa
MACSETTTKVLKLKTSDNEVVEVEEKAALQSEIIKSMVEDGHSTDDAIPLFKVEKKTLAK
IVEWLKKHASDASKDELDKWDADFLDVDTDFLYDLLLASNYLSIEVLLGQLTQKVADMIT
RNQPIKIRELFNIKNDFTPEEKEEILKENSWLFN
NT seq 465 nt   +upstreamnt  +downstreamnt
atggcatgttcagagactacaactaaggttttgaagttgaaaaccagtgacaatgaagtt
gttgaggtggaagagaaggctgccttacaatctgaaatcatcaagagcatggttgaagat
ggccatagtactgatgatgcgattccactcttcaaagtagaaaagaaaaccctagccaag
attgtggagtggttgaagaagcatgcgagcgatgcatctaaggatgagcttgataagtgg
gatgctgattttttagatgttgacacagattttctctatgatcttctcctagcttcgaac
tatctcagcattgaagttttgcttggccaacttacacaaaaagttgcagacatgatcaca
aggaatcaacctattaaaattcgcgaactctttaatatcaagaacgattttaccccagag
gaaaaggaagaaattctcaaggagaattcatggttattcaattga

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