Populus nigra (Lombardy poplar): 133678893
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Entry
133678893 CDS
T10372
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133678893
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133678893
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
133678893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
DFF40
zf-C3HC4_2
CHD1-like_C
Motif
Other DBs
NCBI-GeneID:
133678893
NCBI-ProteinID:
XP_061957386
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Position
18:12771763..12774212
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AA seq
388 aa
AA seq
DB search
MDLNPIKDAFDRVAKKQKMSGSKTHEVVDQMMRDIEKSLEIMKAEQSGSEVDFKNVLGEL
KKKLQESAPLGDQMEGTQKELNIALSKYPKQLEKSFNPDISKAYRNIDFDAHTVNQVIAG
HFYRQGLFDVGDCFINEAKEPESTADMKSLFSEMYLILEAMKNRNLEPALNWAAANSNKL
KENGSDLLLKLHCLQFVEILQGGSRSKALSYVRTHISPFGSTHFSEIQKLMSCLLWSGRL
HQSPYSDLLSPTNWNVVAEDLTRQFCNLLGQSFESPLSVTIAAGFQGLPPLLKFMTVMAG
KKNEWRSMKQLPVPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMSCSHVLCKQSIDK
MSKNGSKTFKCPYCPSDIESTQCKQLHF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaatcccatcaaggacgcatttgatcgtgttgcaaagaagcaaaagatgtct
ggttctaaaacacacgaagttgttgaccagatgatgcgagatattgagaagtcattggaa
attatgaaggcggaacaatctggttctgaagtggactttaaaaatgtccttggtgaactt
aagaaaaagttgcaagaaagtgctccacttggtgatcagatggaaggcacacagaaggaa
ctgaatatagccctgagcaagtacccaaagcagcttgagaaatctttcaacccagatata
tccaaggcttatagaaacattgattttgatgctcacactgttaaccaagtaattgcaggc
catttctatcggcaaggcctgtttgatgttggtgactgctttataaatgaggccaaggaa
ccagaatctactgctgatatgaaatctcttttctcggaaatgtatctgatacttgaagct
atgaagaaccgaaatctagagcctgcactaaactgggctgctgccaattccaataagctc
aaagaaaacgggtcagacctgctgctgaaacttcattgtttacagtttgtggaaatactg
caaggtggaagtagaagcaaagctctttcatatgtcagaactcacatttctccttttggt
tccacccatttttctgaaatccagaagcttatgtcctgtctcctgtggtctggaaggctt
catcaatctccttattctgatttgctatcgcccactaattggaatgtggttgctgaggat
cttacaaggcagttttgcaatctcttggggcagtcttttgaaagcccattgagtgtgaca
atagcagcagggttccagggtctgccaccacttttgaagtttatgactgtgatggcaggg
aagaaaaatgagtggcggtcaatgaaacagttgccagtgcccgtgccagtggagttggga
agggaatttcagttccattcgatctttgtatgtcctgtgtccaaggaacaatcaactgag
gaaaaccctcctatgttaatgtcatgtagccatgtgctatgcaagcagtctatcgacaag
atgtcaaagaacggttcaaaaacctttaaatgcccttactgcccatctgacatcgaatca
acacagtgtaagcagttgcatttctga
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