Populus nigra (Lombardy poplar): 133678987
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Entry
133678987 CDS
T10372
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133678987
Transcription machinery [BR:
pnz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
133678987
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
133678987
NCBI-ProteinID:
XP_061957522
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Position
18:2130803..2134634
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AA seq
512 aa
AA seq
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MGVVSVSSSASRTPLGLSTKFSTYGSTARRPLIVAFKADKSNNTSLVAPHEQIPLPVETT
KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGV
IRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVTSAGKR
KDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKE
HLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFA
NGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE
SIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEE
FIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNL
NISREMVRKHEVKALMKLKHPTRVDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaagtgtttcgagctcagcttctcggacaccactaggattgagcacaaag
ttttcaacttacggatctacagcaagaagacctttgattgtagcatttaaagccgacaaa
tccaacaacacatctttggttgcaccacatgagcaaattccattgcccgtagaaacaacg
aaggggaagaagagacttggaaaaagcaaaaaatcttctaatagattaaaagctgtccgt
actgaagtttctccatgtacattgttagtggattacaatgaagctgctgcgaaacttgaa
aacatatacaagcttagccctggaactgatacttctgacgtggaagacgcaagtggtgtg
attaggagaggtaggcaaaggaaaaggaaaattagtgaaggtgacaaggaaaccgaggat
agaactggtaaaatcattgttaggaaccgggcaaagaaggctaaacgattgagtcttgag
aaaaggatttctctgaggatcaagaatgaagagaaattggtgacttcagctgggaagaga
aaagatcgaaaaaatgaaaatgaaaagattgatgaccttgtgagggagtattcggcttca
actgatttggtcagcttggactggaaaaaaatgaagatacctccggtccttacttcatca
gagcatgtctggttatttaagttgatgcagcctatgaaagcactccttcaagtgaaagag
catctgcaagaaaatctagggggagaaccaactgacgttgaattagctaaagcaacaaat
atggatgtgctccaagtaagaaagcaaatagcagttggtcgagctgcaaggaacaagctc
attaagcacaatcttcggcttgtcttgtttgtgatcaaaaaatattttcaagactttgca
aatgggacaaaatttcaagatttttgtcaggcgggagtgaagggacttattacagcaatt
gatcgctttgaacccaaaaggagattccggctctccacttatgggctattttggattaga
catgccatcatacgatcaatgacactctcaagctttacacgcgtttcgtttggcctggaa
tcgattaggtctgaaatccagaaagcaaaacttgaattgtggtttcaacttaaaagacaa
ccaatggaggatgagattattgaaaaagttcggatctcccctgagaggtaccatgaagtg
acgagggcctcaaaacctgttttgtctctccattcaagacacaaaacaacgcaggaagag
tttattggtggaattgctgatgttgatggaggtgatgaccggaggcagtcagctcttctc
aggcttgcacttgatgatgtgcttgattctctaaaaccaaaggagagcttggtggtccga
cagagatacgggcttgatggtaaaggagacagaacattaggagagattgctgggaactta
aatatctcaagagaaatggtcaggaagcacgaagtaaaagcactcatgaagctcaaacat
ccaactagagtggattatcttcgccgctatgttgtctga
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