KEGG   Populus nigra (Lombardy poplar): 133679078
Entry
133679078         CDS       T10372                                 
Name
(RefSeq) squalene synthase 2 isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00100  Steroid biosynthesis
pnz00909  Sesquiterpenoid and triterpenoid biosynthesis
pnz01100  Metabolic pathways
pnz01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    133679078
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    133679078
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:pnz01006]
    133679078
Enzymes [BR:pnz01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     133679078
Prenyltransferases [BR:pnz01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   133679078
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 133679078
NCBI-ProteinID: XP_061957566
LinkDB
Position
19:11012358..11017925
AA seq 413 aa
MGSLGAILKHPDDLYPLLKLKMAAKHAEKQIPSEPHWAFCYSMLHRVSRSFAFVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDRNWHFSCGTKDYKVLMD
QFHDVSTAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASELEDLASDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNSLIHVDDCLKYMSALREPAIFRFCAIPQVMAIGTLAMC
YNNINVFRGVVKMRRGLTAQVFHRTKTMADVYGAFFDFSCILKSKVDRNDPNATKTLSSL
EAVQKTCRESGALNIRKSYILRNELKYNSVLIVLLFIILSIIFAYLSANRSSY
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggggagtttgggagcgatattaaaacacccagatgatttatacccactattgaagctg
aaaatggctgctaaacatgctgaaaaacagatcccgtctgaacctcactgggctttctgt
tattccatgcttcatcgggtctctcgtagttttgctttcgttattcaacagcttggcaca
gaactccggaacgctgtgtgcattttttacttggttcttcgagcccttgacactgttgag
gatgatacaagcatacctacagacgtcaaagtacctattctgatagcttttcaccgccac
atttatgatcgcaactggcatttctcatgtggtaccaaggactacaaggttcttatggac
cagttccatgatgtttcaactgcttttctagagcttgaaaaaggttaccaggaggcaatt
gaggatattaccaaaagaatgggtgcagggatggcaaagtttatctgcaaggaggtggaa
accattgatgactatgatgaatattgccactatgtagcaggacttgttggactgggcttg
tccaagcttttccatgcctctgaattagaagatttggcttctgatagcatctccaattca
atgggattgtttcttcagaaaacaaacattattcgtgattatctggaggacataaatgag
atacctaagtcacgcatgttttggcctcgcgagatttggagtaaatacgtcaacaaactt
gaggacttgaaatatgaagagaactcggtcaaggcagtacagtgcttgaatgatatggtt
accaattccttgatacatgtggatgattgcttgaaatacatgtctgcattgcgggaacct
gctatatttcggttttgtgctatccctcaggtcatggctatcggaaccctagcaatgtgc
tacaacaacatcaatgtcttcagaggtgtcgtgaagatgagacgaggtcttaccgctcaa
gtttttcatcgaacaaaaacaatggccgatgtctatggagctttctttgacttctcttgt
attctgaagtccaaggttgacaggaacgatcctaatgcaacaaaaacattgagcagtctg
gaagctgtacaaaaaacttgcagggaatccggggctctaaacataaggaaatcttacata
cttaggaatgagctgaaatataattctgttctgatcgtcctcctcttcattatattgtct
attatttttgcttatctctctgccaaccgatcaagttactag

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