Populus nigra (Lombardy poplar): 133679271
Help
Entry
133679271 CDS
T10372
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133679271
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133679271
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133679271
microRNA pathway
RISC loading complex
133679271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133679271
NCBI-ProteinID:
XP_061957798
LinkDB
All DBs
Position
19:1455195..1461637
Genome browser
AA seq
975 aa
AA seq
DB search
MSRRGGGRRSETRRDQDSSTPSPSFQRGGGGGGRGRGGRGGSTPAPSPTPVRAPTSAAPG
YLSATAGPSAKPTPQAAYTAAAASSSSSVGELSQETAKKLTLGGTITTGGLVPVSSKAIV
PPRRPDYGKIGKKCVIRANHFVVEVSDRDLFHYDVAITPEITSKKVNRDVISQLVRSYRE
SHLGNRMPAYDGRKSLYTAGALPFEAKEFVVKLAERGDPASSSSSVKKERQFKVAIKYAS
KVDMYHLKEFLSGRQADAPQETIQILDIVLRASPSEKYITVGRSFFSPDLGPKGDLGDGI
EYWRGYYQSLRPAQMGLSFNIDVSARSFYEPILVTEFVAKYFNFRDLSRPLSDQERVKVK
KALRGIKVQITYSDYTKSYKVTGISNLPVNKTMFTLDDKKTKVSVYQYFQERYNIGLKYT
SLPPLQAGTDAKPIYLPMELCQIAGGQRYTKKLNERQVTALLRATCQRPSARENNIKQMV
RQNDYSRNALVRDEFGIQVNEELTLVDARVLPPPMLKYHDTGRQARVDPRFGQWNMIDKK
MVNGGRIDFWTCLNFSTRVHRELPFEFCWQLMDMCNNKGMEFNPEPIIPIRSADSRQIEK
ALHDVHKQCTAELANQKGKQLQLLIIILPDVTGSYGKIKRVCETELGIVSQCCQPQQAKK
LSKQYMENVALKINVKAGGRNTVLNDAFHRRIPLLTDVPTIVFGADVTHPQAGEDAGPSI
AAVVASMDWPEVTKYRGLVSAQAHREEIIEDLYKKYQDPKKGLVHGGMIRELLIAFKRST
GQKPFRIIFYRDGVSEGQFSQVLLHEMQAIRQACGSLEEGYGPRVTFVVVQKRHHTRFFP
ADHSRRDQTDKSGNILPGTVVDTAICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFS
SDGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDAGSSGGTAEFRP
LPVIKENVKDVMFYC
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggcggccgacgatccgaaactcgtcgtgaccaggactcatccact
ccgtcaccttcatttcagcgcggtggtggtggtggaggccgtggccgtggtggaagaggc
ggctccactcctgctccgtctccaactccagttcgtgctcctacctcggcggcacccggc
tacctctccgcaaccgcaggtccttcggcaaaaccaactcctcaagcggcttatacagcg
gcggcggcttcgagttcctcttcagtcggggagctgagtcaagagaccgcaaagaagttg
acattgggagggaccattacgacgggagggctggtgcctgtctcttcaaaggcgatagtg
cctccgcgacgaccagattatggaaagatagggaagaagtgtgtgattagagcgaatcat
tttgtagttgaggtttctgatagagatctctttcactacgatgtggcaataactcctgaa
attacatcaaagaaagtcaatagagatgtaatatctcaacttgttcgttcttaccgtgag
tctcatctgggcaaccggatgccagcttatgatggaaggaaaagtctatacactgctggt
gcattgccttttgaagcaaaggagtttgttgtgaagttggctgagaggggtgatcctgct
agttcatccagttctgtcaaaaaggagcgtcaatttaaggtggccatcaaatatgcatcc
aaagttgatatgtatcatttgaaggagttccttagtggtagacaagcggatgctccacag
gaaaccatacaaatccttgacattgttctcagagcatcaccatcagagaagtacattact
gttgggcgatcgtttttctcacctgatttgggtccaaaaggcgatctcggtgatggaata
gaatattggagggggtattatcaaagtcttcggccagcccaaatgggactatctttcaat
attgacgtgtcggccagatccttttatgagccaattttggtaactgagtttgtagcgaag
tactttaattttagagacttatcaaggcctctttctgatcaggagcgtgttaaggtgaaa
aaggccttgagaggaatcaaagtacaaattacttacagtgactacactaaaagctacaag
gttactggcatatctaatctaccagtaaacaaaacaatgtttactctggatgataagaaa
acaaaggtgtcagtctatcagtattttcaggagagatacaatattgggctgaaatataca
tctttgcctccccttcaagctggaactgatgcaaaacctatttatttgcccatggagctt
tgtcagattgctggaggacaacgatacactaagaagctaaatgaaagacaagtcacagcc
cttttaagagcaacctgtcaacggccttctgctagggaaaataatattaagcagatggtt
aggcaaaatgattacagtaggaatgcgcttgtgagggatgaatttggaattcaagtgaat
gaagaactcacattggttgatgctcgagtattaccccctcccatgcttaaatatcatgat
acagggcgacaagctagagtggatccgcgctttggacaatggaacatgatagacaagaaa
atggtgaatggaggcagaattgatttctggacctgtttgaacttctctacaagagtgcac
agagagttgccatttgaattttgttggcagttaatggatatgtgcaataacaaaggaatg
gaattcaacccagaacccattattccaatacgctcagctgattctaggcaaattgagaag
gctcttcatgatgttcataagcaatgcactgcagaacttgcaaatcagaaggggaaacag
cttcagctgctgatcattattctacctgatgtcaccggatcctatgggaaaatcaaacgt
gtttgtgaaactgagttaggaatagtttcccaatgctgtcagccccagcaggcaaagaag
cttagcaaacaatacatggaaaatgttgctctcaaaattaatgtgaaggctggggggcga
aacactgtattgaatgatgcttttcatagaagaattcctcttcttactgatgttcctact
attgtttttggtgctgatgtaacccatccacaagcgggagaagacgcaggcccatcaatt
gcagcagtagttgcttctatggattggccagaggtaaccaagtatagaggacttgtctct
gcacaggctcaccgtgaagaaattatcgaggatctttacaaaaaataccaggatccaaag
aagggtttagttcatggtggaatgatcagggaactgttaattgctttcaaaagatccacc
ggccaaaaaccttttagaattatattctacagagatggcgttagtgaaggtcaattcagc
caagttctgctgcatgagatgcaggcaatacgacaggcatgtggctccctagaagaaggg
tatggtcctcgggttacctttgtagtagttcagaaaaggcaccacacacgctttttccct
gctgaccatagcaggcgtgatcagactgacaagagtggcaatatcttaccaggtacagtt
gttgatactgcaatttgccaccctacagagtttgacttctacctaaacagtcatgctgga
attcagggaaccagcagacctacacattaccacgtgttgtttgatgaaaacaacttcagt
tctgatggtttacaaaccctcactaacaatttgtgctacacgtatgcaagatgcactagg
tctgtttccatagtgcctcccgcatattatgctcatttggcagcttttagggcgcgatat
tacattgagggtgaaacatcagatgctggttcatctggtggaactgctgagttccgtcct
cttccggttatcaaagaaaatgtgaaggatgttatgttttactgttga
DBGET
integrated database retrieval system