Populus nigra (Lombardy poplar): 133679445
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Entry
133679445 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133679445
KO
K13091
RNA-binding protein 23/39
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133679445
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
General mRNP proteins
133679445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
133679445
NCBI-ProteinID:
XP_061958034
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Position
19:complement(11767731..11776386)
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AA seq
599 aa
AA seq
DB search
MEFDEYDYLEKTVENPEQPKVRETANGEGDIVKSREKDRLRSSKRRSDDKDDGDDERRRS
KQSRSGDENKDHEQSKERGLSHHRSQSRDGERDRHRSSREHRDRDRGKDRDREERNGKER
DRDRDRREHDRDGEREREREKEKERERSRRSRSRSERHRSDQDEKDREKSRERELREKER
EKEREKERESRERDRESRRYKERKEEATEPEADPERDQRTVFAYQICLKADERDVYEFFS
RAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLSQPVMVKPSEAEKNL
VQSTTAVASGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEPFGAVELVQLPHDESGHC
KGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQAGAQDGGTNVGDFDDDEGGGL
ALNARSRAILMQKLDRTGTASSITGSLGTPTLPTAPILGAAPAVSPAVAPLLSGSVLAIP
GLPVAGLQLPATTIPTVETIGVPSDCILLKNMFDPKTETEPDFDLDIKEDVQEECSRFGN
VKHIHVDKNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQTYEAKFPDST
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatgaatatgactacttagagaaaacagttgagaatccggaacaaccaaag
gtgagggaaactgctaatggtgagggtgatattgtgaaatccagggaaaaggatcgactg
cggagttcaaagcgtaggagtgatgataaggatgatggtgatgatgaacgaagacgttcg
aagcaatctagatctggagatgagaataaggaccatgaacagagtaaagaaaggggtttg
tcccatcatcggtcacaatctagagatggagagagggatcgccacaggagtagcagggaa
catagggatagggacagaggtaaggatagagacagggaagagagaaatgggaaagaaagg
gatcgtgatcgagataggagggaacatgaccgcgatggtgaaagggagagggagagagag
aaggagaaggaaagagagcgatcgcgtcgaagcaggagtagatcagaaaggcatagaagt
gatcaggatgaaaaggatagagagaagagccgggagagggagcttagagaaaaggaaaga
gaaaaggaaagagaaaaggagagggagtcaagggaacgggacagagaaagcagaagatat
aaagaaaggaaggaagaagcgacagagcctgaggctgatcctgaaagagaccagaggaca
gtatttgcctatcagatatgtttgaaggcggatgaaagagatgtctatgaatttttctca
agggctggcaaggtgcgagatgtacgactcatcatggatcgcaattcaagacgatcaaaa
ggagttggctatatcgagttctatgatgcgatgtccgtgcccatggcgatagcactctct
ggacagccccttcttagtcaaccagtgatggtgaaaccttctgaagctgaaaagaatctt
gttcagtcaactacagctgtggcatcgggtgggcttataggcccctacacaggaggggct
agaaggttgtatatcggcaacctgcacttcaacataaccgaagatcaacttcgtcaggtg
tttgagccgtttggtgctgtggaattggtgcaattgcctcacgatgaaagtgggcattgc
aaaggttttggttttgtccagtttgcacgtctagaagatgctagaaatgcactaaacttg
aatggacaagtggagattgcaggaaggccaatcaaggtgtcagctgttactgatcaagct
ggagcacaagatggtgggacaaatgttggtgattttgatgatgatgaaggtggtggcttg
gcgctgaatgcacgttctcgggcaattttgatgcagaagttagatcgcactggcactgcc
tcaagtattactggttcactaggcacccctactctaccaacagcacctatccttggggct
gcacctgcggtgtctcctgctgttgctcctcttttatcaggttctgttctggctatacct
ggacttccagttgcaggtcttcaacttcctgctactacaattccaaccgtggagacaatt
ggagtcccaagtgattgcatactcttgaaaaacatgtttgatccaaaaacagagactgaa
ccagattttgatttggatattaaagaagatgttcaagaggaatgctcaaggtttggaaat
gtgaagcatatacatgtcgacaagaacagtgccggttttgtttacatgcgttttgagaac
atgcaaggtgctgtaaatgcacagcgagctctccatggaagatggtttgctgggaagatg
atcactgcaacattcatggttccccagacctacgaggccaagtttcctgacagcacatag
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