Populus nigra (Lombardy poplar): 133679732
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Entry
133679732 CDS
T10372
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133679732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133679732
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133679732
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
U-box type E3
133679732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
Arm_2
zf-RING_UBOX
Neurochondrin
zf-C3HC4_4
zf-Nse
KAP
HEAT_EZ
zf-C3HC4_2
MCAfunc
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
133679732
NCBI-ProteinID:
XP_061958399
LinkDB
All DBs
Position
19:complement(4729717..4734595)
Genome browser
AA seq
664 aa
AA seq
DB search
MMEEENGALVVQSMIETVNEIASISDYRCAVKKQYCNLARRLKLLTPMLEEIRDSKDSII
PQQTLKALVSLKQALDSAKDLLKFGSEGSKIYMVLEREQIMNKYHEVTAKLEKALSGISY
ESLDISDEVKEQVELVLSQFRRAKGRVDDTDVELYEDLFSLYNKIDDSAKDLAVLRRLSE
KLQLLGIADLTQESLALHEMVAATGGDPGENIEKMSMLLKKIKDFVQTENPNLDAPAREK
NLPPSGSGQAFADGSHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEGGHD
TCPKTLQKLTSAALTPNYVLRSLIAQWCEANGIEPPKRPSSSGSNKTVSTCSPAERTKTE
ILLHKLASGSLEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAI
TALLNLSICEENKGSIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSL
GAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTETGGGMID
EALAILAILASHPEGKAIIGAAEAVPVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHLVE
AQEHGVMGPLVDLAQNGTDRGKRKAQQLLERISRFFEQQKHTQAQIEAHIQQPQPPTMAH
SGDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggagaacggagcactggtagtgcaaagtatgatagagacagtgaacgag
atagcttcgatctcagattacagatgcgcggtcaagaagcagtattgcaatctagctagg
aggttgaagttattgacaccaatgttggaagagattagagacagcaaagactccatcatc
cctcaacaaactctcaaagctcttgtttcgctcaaacaagctttggattccgctaaagat
ttgcttaaatttggtagcgaaggaagcaagatttacatggtcctagagagggaacaaatt
atgaataaataccatgaggtgacagctaaattggagaaagctctaagtggaatttcctac
gaaagccttgacatatctgatgaagttaaggaacaggttgagcttgtcctttctcaattt
agaagagccaaaggaagggtcgatgatactgatgttgagctgtatgaagatctcttctcc
ctttacaacaagattgatgattcagcaaaagatctagctgtcctaagaaggttgtctgag
aagttacagttgttgggaatagctgaccttacacaagagtctctagctttgcatgagatg
gttgctgccactggtggagatcctggggagaacattgagaagatgtcaatgcttctgaag
aaaattaaagattttgtgcaaacagaaaacccaaacttggatgctccagcaagagaaaag
aatcttcccccaagtggaagtggacaagcttttgctgatggaagtcacaagacaccagtt
ataccagatgatttccgctgtccaatatccctggaattgatgaaggatcctgtcattgtt
tcaacagggcagacctatgaacgttcctgcattgagaaatggctggaaggagggcatgac
acatgtccaaagacactacagaaactcaccagtgctgctctgacaccgaactatgttcta
cgcagcctcatagcccagtggtgtgaggccaatggcattgagccaccaaaaagacccagc
agttctgggtcaaataaaactgtatctacttgctcacctgctgagcgtacaaagactgaa
attctccttcacaagcttgcatctggcagccttgaagaccagcggtctgctgctggtgag
atccgtcttcttgccaagcgaaatgctgataatcgtgtggctattgctgaagctggtgca
atccctctccttgtaggcctcctctcaactcctgactctcgcacccaagagcacgcaatt
acagcgcttcttaacctctccatatgtgaagaaaacaaaggaagcattgtttcagctggg
gcagttcctggtatagtgcatgtgctcaagaagggcagtatggaagctcgagaaaatgct
gcagccacccttttcagcctttcagttgtggatgaaaataaggttacaattggttctttg
ggggccatccctccactggtgactcttctaagtgaaggaacacaaagggggaagaaggat
gcggcgactgcacttttcaacttgtgcatttatcaggggaacaagggaaaggcagtgagg
gcaggagttgtgcccacattgatgcgtctattgacggaaacaggtggtggaatgattgat
gaggcattggctatactagcaatactggctagccaccctgaagggaaggcaatcattgga
gctgcggaggctgtcccggttttggtggaagttatcaggaatgggtcacccaggaacaga
gagaatgcagcagcagtgttggtgcatctttgttctggagaccaaaaacatctggtagag
gcacaagagcatggagtgatggggccgctggtggatttggcacaaaatggcacagacagg
ggaaagaggaaggctcaacagttgcttgagcgtataagcagattctttgagcaacaaaag
cacactcaggcacaaatcgaggctcacatccaacagcctcagccacccaccatggctcat
tctggtgatagctga
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