Populus nigra (Lombardy poplar): 133679989
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Entry
133679989 CDS
T10372
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6-like
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133679989
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133679989
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133679989
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C85
133679989
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
133679989
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
ASNSD1-SEP
CR_prot_dom_plant
UBA
Motif
Other DBs
NCBI-GeneID:
133679989
NCBI-ProteinID:
XP_061958739
LinkDB
All DBs
Position
19:13162507..13167516
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AA seq
534 aa
AA seq
DB search
MTRILVQRGSGSSSNQSRAGSSSSAARPDTQGTSIPQSASTVRDEEIGEEVQEQVVVDEV
LENSGSNDNKVVKSDELLTVSINDDRIESLNDDIVDNEKVGNDEGVGSGDLVKGLSGLIL
ERSLVESEGSSAGYPEVGSGSPQPPPPPVPPPKPAQTNSNSRRFMSGASNSVRIGSSRRA
VAWPVVSTRSSPTGSRPSSPRSHGKNEGYNSGDEQNPCFVSTYDDFERERQFEIDIRRSK
GLEVKKMLEDGNCLFRAVADQVYGDSEMYDLARQMCIDYMERERDHFSQFITEGFTSYCK
RKRRDKVYGNNVEIQALSEMYNRPIHIYSYSTEPINIFHGSYNTDTPPIRLSYHHGNHYN
SLVNPRRSTIGAGLGFSCLQGASVDRDQIKAAIKAQQDQQIDNALLAEGRFYSDLELTEK
EIERMVMEASRAEYLADNKFKPQLGRKESSTAGAEPSSSSARSSASEMSKADGVREHGSQ
DTVLSSSMQMVLSMGFSYLQVIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactcggattctagttcagcgaggcagtggttcttcttcaaaccagagccgagcaggg
tcttcttcttcggctgctcggccagatacacagggtactagcatcccccagtctgcgtca
actgtgagagatgaagaaattggcgaggaggtgcaagagcaggtagtggttgatgaagta
ttggagaacagtggtagtaatgataataaagtggtaaaaagtgatgaacttttgacagtc
agtataaatgatgaccgaattgagagtttgaatgacgacattgttgataacgagaaagta
ggtaatgatgaaggggtgggctcaggggatttggttaaaggattgagtggattgattttg
gagagatctctggtggagagtgaaggttcaagtgctggttatcctgaggttggtagtgga
agcccacaaccaccacctcctcctgtgccacctcccaaacctgcccaaacaaactcgaat
tcaagaagatttatgtcaggagcttcaaattctgtgcgaattggatcatctaggagagca
gttgcttggcctgttgtttcaacaaggtcttcaccaactggatcacggccatcctctcct
aggtctcatggtaaaaatgaggggtacaatagtggtgatgagcagaatccatgctttgtt
tccacctatgatgattttgaaagagaacggcagtttgagattgacatcagaaggtccaaa
ggattagaagtcaaaaaaatgttggaggatgggaattgtctctttcgtgctgtggctgat
caggtttacggggattctgaaatgtatgatttggcccgacaaatgtgcatagactatatg
gaaagggaaagggatcacttttctcaattcataactgaaggttttacatcttactgtaag
aggaagagaagagacaaggtttatggaaacaatgtagagattcaagctttatcagaaatg
tacaatcgaccaatccacatttactcttatagcacagaacctatcaacatatttcatggg
agctacaatactgacacaccgcccatacgtctaagttatcatcatggtaatcattacaac
tctcttgtcaaccctcgtcgttcaacaattggtgctggacttggtttcagctgtcttcaa
ggggcaagtgtggacagagatcagatcaaagctgctattaaagctcaacaagaccagcag
attgataatgcacttcttgctgaggggcggttttactctgatcttgaacttactgagaag
gagatcgagcgcatggtgatggaagcttctagagctgagtatcttgctgacaacaagttc
aaaccacaacttggccgtaaagaatcttctactgctggtgctgaaccatcatcttctagt
gctagatcatcagctagtgagatgtctaaggcggatggtgtaagagaacatggctcacag
gatactgttcttagcagtagtatgcagatggtgctgtcaatgggattcagttacctgcaa
gtgatcgaggcctacagcatatttggtgatgatgtggattcaatggtttgttacctcttg
gaaactggcagcagcagcagacggaaaggcaaggcaaccgaataa
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