KEGG   Populus nigra (Lombardy poplar): 133679998
Entry
133679998         CDS       T10372                                 
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00730  Thiamine metabolism
pnz01100  Metabolic pathways
pnz01240  Biosynthesis of cofactors
Module
pnz_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    133679998
Enzymes [BR:pnz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     133679998
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-GeneID: 133679998
NCBI-ProteinID: XP_061958752
LinkDB
Position
19:5759404..5763608
AA seq 637 aa
MASVQATAILISSAVTKNGNTTACLPLGFVISSAACKKEFCAHSMASGARATLTFDPPTR
TNQKKHTVDPSSPDFLPLPSFEQCFPKSTKEYREVKHEESGHVLKVPFRRVHLSGDEPGF
DNYDTSGPQNISPRVGLPKLRKEWVDRREKLGTPRYTQMYYAKQGIITEEMLYCAAREKL
DPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW
ATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLSWEVFRET
LIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKENFAYEHWDD
ILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHI
PMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTP
KEHLGLPNRDDVKTGVIAYKISAHAADLAKGHPHAQAWDDALSKARFEFRWMDQFALSLD
PMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGNAEEAVQHGMD
AMSAEFLAARKTISGEQHGEVGGEIYLPASYISSSER
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggcgtctgtccaagccactgctatcttgatatcctcagctgtaaccaagaatggcaat
accactgcctgcttgccacttggatttgttatttcaagtgctgcatgcaagaaggagttt
tgcgctcactctatggcgtcgggagccagagctactctcacatttgatccaccaacaaga
actaaccaaaagaagcacacagtcgatccttcttctcctgactttcttcctcttccttct
tttgaacagtgttttccaaagagcaccaaagaatacagggaagttaaacatgaagaatct
ggtcatgtactaaaagttccgttccggcgagtccatttgtccggcgatgaaccaggtttt
gataactacgataccagtggtcctcaaaacatcagtccccgcgtaggacttcctaagctt
cgtaaagaatgggtagacaggcgggagaagctaggtacaccaaggtacactcagatgtat
tatgcgaagcagggaattataaccgaggaaatgctgtactgtgctgctcgtgaaaagctt
gatccggagtttgtgaggtcagaggttgcacgtgggagggcaattatcccttccaacaag
aagcacttggagctggaaccgatgattgttggaagaaattttttggttaaagttaatgca
aatatcggaaattctgctgttgcaagctctatcgaggaagaagtttataaggttcaatgg
gcaactatgtggggtgccgatactgttatggatctttccactggtcgccacattcatgag
actcgggagtggatcctacgtaactctgctgtgccagtaggtactgtgcctatctatcaa
gcacttgagaaagtaaatggaattgctgaaaaccttagctgggaagttttcagagaaacc
ctgattgaacaagctgagcagggtgtagattatttcacaattcatgccggggttctgctg
cggtacatccccttaactgcaaagcgcatgacaggaatagtttcaagaggaggatcaatc
catgctaagtggtgcttaacttatcacaaggagaactttgcctatgaacactgggatgat
attcttgacatatgcaaccaatatgatgtggccctgtcaattggcgatggactgaggcct
ggttccatatatgatgccaatgacactgcccaattcgcagagcttttaactcaaggggaa
ctgactcgtcgagcatgggaaaaggatgtacaggttatgaatgaagggcctggacatatt
ccaatgcacaagattcctgagaacatgcaaaaacagctagagtggtgcaatgaagctcct
ttctatactcttggacccctaacaacagacatcgctcctggatatgaccacatcacctct
gccattggcgctgccaatattggggctcttggcactgcacttctctgttatgtcacacca
aaggagcaccttggactgccaaatagagatgatgtgaagactggggttatagcatacaag
atatctgctcatgctgctgatttggcaaaaggtcacccccatgctcaagcctgggatgat
gctttaagcaaggctagatttgagttccgatggatggatcagtttgctctatcattggac
cccatgacggccatgtccttccatgatgaaaccctcccatcagaaggtgcaaaagtggca
catttttgctccatgtgcggacctaagttctgctctatgaagataacagaggatgttcga
aagtatgcagaggagcatggttatggtaatgcagaggaagctgtgcaacatgggatggat
gccatgagcgctgagttcctggctgctaggaaaactataagcggagaacaacatggtgaa
gttggtggagaaatttacctgccagcaagctacatcagttcctctgagaggtga

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