Populus nigra (Lombardy poplar): 133679998
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Entry
133679998 CDS
T10372
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00730
Thiamine metabolism
pnz01100
Metabolic pathways
pnz01240
Biosynthesis of cofactors
Module
pnz_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
133679998
Enzymes [BR:
pnz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
133679998
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
133679998
NCBI-ProteinID:
XP_061958752
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Position
19:5759404..5763608
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AA seq
637 aa
AA seq
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MASVQATAILISSAVTKNGNTTACLPLGFVISSAACKKEFCAHSMASGARATLTFDPPTR
TNQKKHTVDPSSPDFLPLPSFEQCFPKSTKEYREVKHEESGHVLKVPFRRVHLSGDEPGF
DNYDTSGPQNISPRVGLPKLRKEWVDRREKLGTPRYTQMYYAKQGIITEEMLYCAAREKL
DPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQW
ATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLSWEVFRET
LIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKENFAYEHWDD
ILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHI
PMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTP
KEHLGLPNRDDVKTGVIAYKISAHAADLAKGHPHAQAWDDALSKARFEFRWMDQFALSLD
PMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGNAEEAVQHGMD
AMSAEFLAARKTISGEQHGEVGGEIYLPASYISSSER
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtccaagccactgctatcttgatatcctcagctgtaaccaagaatggcaat
accactgcctgcttgccacttggatttgttatttcaagtgctgcatgcaagaaggagttt
tgcgctcactctatggcgtcgggagccagagctactctcacatttgatccaccaacaaga
actaaccaaaagaagcacacagtcgatccttcttctcctgactttcttcctcttccttct
tttgaacagtgttttccaaagagcaccaaagaatacagggaagttaaacatgaagaatct
ggtcatgtactaaaagttccgttccggcgagtccatttgtccggcgatgaaccaggtttt
gataactacgataccagtggtcctcaaaacatcagtccccgcgtaggacttcctaagctt
cgtaaagaatgggtagacaggcgggagaagctaggtacaccaaggtacactcagatgtat
tatgcgaagcagggaattataaccgaggaaatgctgtactgtgctgctcgtgaaaagctt
gatccggagtttgtgaggtcagaggttgcacgtgggagggcaattatcccttccaacaag
aagcacttggagctggaaccgatgattgttggaagaaattttttggttaaagttaatgca
aatatcggaaattctgctgttgcaagctctatcgaggaagaagtttataaggttcaatgg
gcaactatgtggggtgccgatactgttatggatctttccactggtcgccacattcatgag
actcgggagtggatcctacgtaactctgctgtgccagtaggtactgtgcctatctatcaa
gcacttgagaaagtaaatggaattgctgaaaaccttagctgggaagttttcagagaaacc
ctgattgaacaagctgagcagggtgtagattatttcacaattcatgccggggttctgctg
cggtacatccccttaactgcaaagcgcatgacaggaatagtttcaagaggaggatcaatc
catgctaagtggtgcttaacttatcacaaggagaactttgcctatgaacactgggatgat
attcttgacatatgcaaccaatatgatgtggccctgtcaattggcgatggactgaggcct
ggttccatatatgatgccaatgacactgcccaattcgcagagcttttaactcaaggggaa
ctgactcgtcgagcatgggaaaaggatgtacaggttatgaatgaagggcctggacatatt
ccaatgcacaagattcctgagaacatgcaaaaacagctagagtggtgcaatgaagctcct
ttctatactcttggacccctaacaacagacatcgctcctggatatgaccacatcacctct
gccattggcgctgccaatattggggctcttggcactgcacttctctgttatgtcacacca
aaggagcaccttggactgccaaatagagatgatgtgaagactggggttatagcatacaag
atatctgctcatgctgctgatttggcaaaaggtcacccccatgctcaagcctgggatgat
gctttaagcaaggctagatttgagttccgatggatggatcagtttgctctatcattggac
cccatgacggccatgtccttccatgatgaaaccctcccatcagaaggtgcaaaagtggca
catttttgctccatgtgcggacctaagttctgctctatgaagataacagaggatgttcga
aagtatgcagaggagcatggttatggtaatgcagaggaagctgtgcaacatgggatggat
gccatgagcgctgagttcctggctgctaggaaaactataagcggagaacaacatggtgaa
gttggtggagaaatttacctgccagcaagctacatcagttcctctgagaggtga
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