Populus nigra (Lombardy poplar): 133680007
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Entry
133680007 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133680007
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133680007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133680007
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
GTPases
133680007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
SRPRB
Motif
Other DBs
NCBI-GeneID:
133680007
NCBI-ProteinID:
XP_061958767
LinkDB
All DBs
Position
19:12734553..12738160
Genome browser
AA seq
1028 aa
AA seq
DB search
MGDFDDTRNIRNMCILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDFLDEEQRRA
ITMKSSSISLHYKDYSVNLIDSPGHMDFCSEVSTAARLSDGGLVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLICELKMSPMEAYNRLVKIVHEVNGIMSAYKSEKYLSDVDS
IRAGPSGEGEDENLEFIEDDEEDTFQPQKGNVAFACALDGWGFTIHEFAEFYATKLGASS
AALQKALWGPRYFHPKTKMITVKKFVDAGSRERPMFVQFVLEPLWQVYQSALEPDGNKGL
LEKVIKSFNLNVPPRELLNKDPKAVLQSVMSRWLPLSDAILSMVVKCMPDPIAAQSFRIS
RLIPKREVLLDGVDSSALAEADLVRMSIEVCDSSPEAPCVAFVSKMFAVPTKLLPQRGLN
GEILSNFSDENGNSESDECFLAFARIFSGVLCSGQRVFVLSALYDPLKGESMQKHIQVAE
LHSLYLMMGQGLKPVASAKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSMAFQVAPTLR
VAIEPSDPADSAALMKGLKLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFA
KVSLEVSPPLVSYRETIEGEASNMLDNLKSSTRSSDYVEKMTPNGRCVVRVQVMKLPSAL
TMVLDKSTDLLGDIIGGKLGQSASNLETERSNIVQDESPVEVLKKRIMGAVESDILSLSK
KDKDRAEKYKLKWQKFLKRIWALGPRQVGPNILFTPDSKSLSNDSSALVRGSPHVSERLG
LVECFGNGEMPADTSSEELSALYREAESLQNSVVSGFQLATAAGPLCDEPMWGLAFVVEA
SINPLAEKFDDSESNQQSEQYAIFTGQVMTAVKDACRAAVLQKKPRLVEAMYFCELNTPP
EYLGSMYAVLNQKRAQVLNEEMQEGFALFSVQAYVPVSESFGFAEDLRRKTAGAASALLV
LSHWEELSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQFATK
QRTRARKV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttgatgatacccgaaatatacgaaacatgtgcatactagcacatgttgat
catggcaagacaactcttgctgaccatttaattgctgcaacgggtgggggtttgcttcac
cctaaattagctgggaaacttaggtttatggattttcttgatgaggaacaaaggcgtgcg
ataacgatgaagagctcgtcgatttctcttcattataaggattattcagtcaaccttata
gattcacctggtcatatggatttttgtagtgaggtttcaactgctgcgaggttgagtgac
gggggattggttttggttgatgctgttgagggggtacatatacagacacatgctgttttg
cgtcaagcttggattgagaagcttacgccttgtttagtgcttaataagattgataggttg
atatgtgagttgaaaatgagtccgatggaagcctataatcggttggtgaagattgttcat
gaggtgaatgggataatgagtgcttataagtcggagaagtatttgtctgatgttgattca
atacgtgctgggccctctggtgagggtgaggatgagaatcttgagtttatagaggatgat
gaggaggacacttttcaaccacagaaagggaatgtggcatttgcttgtgcactggatggg
tggggttttactattcatgagtttgctgagttttatgccacaaagcttggagcaagttca
gctgcattgcagaaggctctctggggtcctaggtatttccatccgaagacaaagatgatt
acggtgaagaagtttgtggatgcaggcagcagggagcgtcctatgtttgtgcagtttgtg
ctggaaccactgtggcaagtttaccaatctgctttagagcctgatgggaataaaggctta
ctcgagaaagtcataaaatcatttaatttgaatgtaccaccccgtgagcttttgaataag
gatccaaaggctgtgctgcaatctgttatgagtcgctggcttcctttgtcagatgcaatt
ttgtcgatggttgtgaagtgcatgccggatccaattgcagctcaatccttccggatatca
cgtttgattcccaagagagaagttttgcttgatggggtcgactctagtgctcttgcagag
gcggatcttgttagaatgtctattgaggtttgtgattccagtcctgaagcaccttgtgtt
gcttttgtatccaaaatgtttgccgtcccaacaaaattgttacctcaaaggggtttgaat
ggggagattctgagcaattttagtgatgaaaatggaaacagtgaatcagatgagtgtttc
cttgcatttgctagaatttttagcggggttctttgttctggacaaagagtctttgtgctt
tcagcattgtatgacccattgaagggggagtcaatgcagaagcacatacaggtggctgag
ctgcactcgttgtatctaatgatgggtcaaggcttgaaaccagtggcttctgcaaaggct
gggaatgttgtggcgatccgaggccttggccagcatatattgaaaagtgcaactctatca
tccaccaaaaactgctggcctttctcaagcatggcattccaggtggccccaactctgaga
gttgctattgagccttctgatccagctgattctgctgctctgatgaaaggtttaaagctt
ctgaaccgggccgatccatttgtggaggttactgtttcctctagaggggaacatgttctg
gctgctgctggagaagttcatctggaaaggtgcattaaggatttgaaagagaggtttgca
aaagtgagcctggaagtctctccacctcttgtgtcctatagggagactattgagggagaa
gcgtccaatatgttggataacctgaaatcatcaactagaagctcagattatgttgagaag
atgacaccgaatggaagatgtgttgttcgtgtgcaagtcatgaaacttccatctgcacta
accatggtgcttgataaaagcactgatctattaggagatattatcggtggtaagctgggg
cagtcagctagcaacttggaaacagagagatcaaacattgtgcaagatgagagtccagtt
gaagttctaaaaaaacgcataatgggtgctgtggagagtgacattttgtcattgagtaag
aaggacaaggatcgggctgaaaagtacaaacttaagtggcaaaagtttctaaagaggatc
tgggcacttggaccgagacaagttggccctaacatcctcttcactcctgattccaaaagc
ttgagcaatgattcctctgctcttgtacggggttcccctcacgtttctgaaaggttgggg
ctggtggaatgttttggtaatggtgaaatgcctgctgacacatcctcagaagagctcagt
gcattatacagggaagcagagagtcttcagaacagtgtagtgtctggatttcaactagca
acagcagctggccccttatgtgatgaaccaatgtggggactggcttttgttgttgaggcc
agcataaatcctttggctgagaaatttgatgattccgagtctaatcaacaatctgagcag
tatgcgatcttcactggacaggtaatgacagctgtgaaagatgcatgtagagcagctgtg
cttcagaagaaacctcggcttgttgaagcaatgtatttttgtgagttgaacaccccacct
gaatatctgggctctatgtatgctgtgcttaatcagaaacgagcccaggtcttaaacgag
gaaatgcaggaaggatttgcacttttctcggttcaagcatacgtcccggtttctgaaagc
tttggtttcgctgaagatcttagaagaaagactgcgggtgctgcaagtgctcttcttgta
ctgagtcactgggaagaactttctgaggatcctttctttgtacctaaaacagaagaggag
attgaagagtttggagatggttctagtgttcttcctaacacagcaagaaagctcattgat
gctgtaaggcggcggaagggcctccctgtggaggaaaaagtagtccagtttgcaactaaa
cagaggacccgtgctcgtaaagtgtag
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integrated database retrieval system
