KEGG   Populus nigra (Lombardy poplar): 133680008
Entry
133680008         CDS       T10372                                 
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
  KO
K15172  transcription elongation factor SPT5
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03250  Viral life cycle - HIV-1
Brite
Transcription machinery [BR:pnz03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     133680008
  RNA polymerase I system
     133680008
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     133680008
SSDB
Other DBs
NCBI-GeneID: 133680008
NCBI-ProteinID: XP_061958768
LinkDB
Position
19:11098876..11106917
AA seq 1047 aa
MARRRDEDDDLEDEEYEEQEEQLMDEEEEYEEEEEEDRGAAIKKRRRSDFIDDIAEEEDE
EEEDDDDDEDYGGGGGGGGGGGRKQKGKKRRGSEFFDDIAQVASDDDEEEEDAEDDFIVD
DHGADLPDEASGRRMHRPLLSREDDQEDVEALERSIQARYAKSMHSEYDEETTEVEQQAL
LPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSVVALDHLKNYIYIEADKEA
HVREACKGLRNIFGQKIMLVPIREMTDVLSVESKVIDLSRDTWVRMKIGTYKGDLAKVVD
VDNVRQRVTVKLIPRIDLQALANKLEGREAPKKKAFVPPPRFMNVDEARELHIRVERRRD
PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIKPSFDELEKFRSPGENGDGDVASLST
LFANRKKGHFMKGDAVIVVKGDLKSLKGWVEKVDEENVHIRPEMKGLPKTLAVNEKELCK
YFEPGNHVKVVSGTHEGVTGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTGVTK
IGDYELHDLVLLDNMSFGLIIRVESEAFQVLKGVTERAEVALVRLREIKCKIEKKTNVQD
RYKNTVSVKDVVRIIDGPCKGKQGPVEHIYRGVLFIYDRHHLEHAGYICAKSHSCIVIGG
SRSNGDRNGDSYSRLGSFKTPRVPPSPRRFPRGGPPFDSGGRNRGGRGGHDALVGTTIKV
RQGPFKGYRGRVVDIKGQFVRVELESQMKVVTVDRSHISDNVVVSTPYRDAPRYGMGSET
PMHPSRTPLRPYMTPMRDSGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPGSWGT
SPQYQPGSPPSGTYEAPTPGSGWASTPGGNYSEAGTPRDSSSAYANAPSPYLPSTPGGQP
MTPSSASYLPGTPGGQLMTPGTNGLDMMSPVIGGDGEGPWFIPDILVTVHRTADESAVGV
IREVLQDGSCKIVLGAHGNGETITALPSEIEMVVPRKSDKIKILGGAHRGATGKLIGVDG
TDGIVKLEDTLDVKILDMVILAKLAQM
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggcccgtcgaagagacgaagacgacgaccttgaagatgaagagtacgaggagcaggaa
gagcaactgatggatgaagaagaggagtatgaagaggaagaagaagaggatagaggagcg
gcgattaagaagagacggagatcagatttcattgatgatatcgcggaggaggaggatgag
gaagaagaagatgatgacgatgatgaggattatggtggtggaggtggtggtggaggtgga
ggtggtaggaagcagaaggggaagaagcggcgtggttctgagttttttgatgatattgcg
caagttgccagtgatgacgacgaagaagaagaagatgccgaggatgattttatagttgat
gatcatggagctgatttacctgatgaggctagtggtagaaggatgcatcggccattgctg
tcacgtgaggatgatcaagaagatgttgaagcgcttgagagaagtatccaagctagatat
gcaaagtcaatgcactcggaatatgatgaagagactacggaagtggagcaacaagctctt
ttgccatccgttcgggatccaaaattatggatggtcaagtgtgcaattggccgggaacgg
gaaacggctgtttgtttgatgcaaaaatacattgataaaggatctgagttgcaaattcgg
tctgttgttgctcttgatcatcttaaaaactatatatatattgaagcagacaaagaagcc
catgtgcgagaggcttgtaaaggcttgcgcaatatttttgggcagaaaatcatgcttgtc
ccaatcagagaaatgactgatgttctttcagttgaaagcaaagtaattgatctttccagg
gacacatgggtcaggatgaagattgggacttacaaaggagaccttgccaaagttgtagat
gtagacaatgtgcggcagagagttacagtaaagttaattccaaggattgacttacaggct
ctggcaaacaaactggaaggcagagaagcaccaaagaagaaggcatttgtacctcctcca
cgttttatgaatgttgatgaagctagggaattacatattcgtgtcgagcgaagaagagat
ccgatgactggtgattattttgaaaatattggcgggatgctttttaaagatggtttcttg
tataaaactgtatcaatgaagtcaattagtgctcagaacattaagccatcatttgatgaa
cttgagaagtttcgatcacctggagagaatggagatggtgatgttgccagtttgtcaacc
ttgtttgcaaacagaaagaagggtcattttatgaagggtgatgcagttattgttgtcaag
ggagatctgaaaagtctaaagggatgggttgagaaagttgatgaagaaaatgttcatatt
agacctgaaatgaagggtcttccgaaaacacttgcagtgaatgaaaaggaactatgcaag
tattttgaacctggcaatcacgtgaaggttgtatcaggcacacatgaaggtgtcaccggc
atggttgttaaggttgagcagcatgtgctcattattctatctgatacaacaaaggaacat
atccgtgtatttgctgatgatgttgtggaaagttctgaggtaacgacaggtgttaccaaa
attggggactatgagcttcatgatcttgtactattggacaatatgagctttggtttaatc
atccgtgtagaaagtgaagcctttcaggttctcaagggagttacagagagggctgaggtt
gcacttgttagactaagagagatcaaatgcaaaattgagaagaaaacgaacgtgcaagat
cggtacaagaacacagtatcggtgaaagatgttgttaggatcattgatggtccttgcaaa
gggaaacaaggtcctgtagagcacatatatagaggagtcttgttcatctatgatcggcat
caccttgagcatgctggatatatttgtgctaaatcccactcgtgtattgtcatcggagga
tcacgttctaatggagatagaaatggtgattcctactcaaggttgggcagttttaaaact
ccccgggtacccccttcaccaaggagatttcctagaggaggccctccattcgactctggg
ggaagaaatagaggtggaaggggagggcacgatgctttggttggtaccacaataaaggta
cgacagggccctttcaagggctaccgtggtcgtgttgtagatatcaaaggtcaatttgtt
agagttgaactagaatcacaaatgaaggttgttacagttgatcggagccacatctcagat
aatgtggttgtttcaactccataccgtgatgcacctcgatatggtatgggaagtgaaacc
ccaatgcatccttctcggactccattgcgtccatacatgacaccaatgagagattcagga
gcgacacctattcatgatggcatgaggacacctatgcgtgatcgagcctggaatccttat
gcaccaatgagtcctccaagggataattgggaagatgggaaccctggctcttggggaacc
agtccgcagtatcagccaggaagccctccctctggaacatatgaagctccaactcctggt
tcaggctgggctagcactcctggtggtaattatagtgaagctggaacaccaagagatagc
agttctgcatatgccaatgctccaagcccatacctgccatcaactcctggtggccagcct
atgacacccagttcggcatcctatctccccggcactcctggagggcagctaatgacaccc
ggaactaatggtcttgatatgatgtctcctgttataggtggagatggtgaaggaccatgg
ttcataccagacatattggttaccgttcaccggactgcagatgaatctgctgttggtgtc
atcagagaggtgcttcaggatggctcttgtaaaatagtccttggggctcatggcaacgga
gaaacgataactgctcttcctagtgaaattgagatggtggtgccaaggaaatcagacaag
atcaagatcctgggtggtgcacatcgtggtgctactggcaagttaattggcgttgatggc
actgatggaattgtaaagttggaggacactcttgatgttaagatattagatatggttata
ctggcaaaacttgcacagatgtga

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