Populus nigra (Lombardy poplar): 133680024
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Entry
133680024 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133680024
KO
K16912
ribosomal biogenesis protein LAS1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133680024
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
133680024
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Gene cluster
GFIT
Motif
Pfam:
Las1
Motif
Other DBs
NCBI-GeneID:
133680024
NCBI-ProteinID:
XP_061958792
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Position
19:7449528..7456512
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AA seq
630 aa
AA seq
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MESLLGFQDETIAVVGDDQEKSTSSSYGYKLVPWLNWNEWECVRDSLFSGSPEKIHSAIT
RISTWRSRGCLPAVIDVTASIIEVQQKDPLYRKDLPDDAIHSEQMLAMLYCMAILRLVNC
VVEKTRKKTEVSIAEAAGAIGIPRTLIDIRHEGSHRDLPALALVRDSAVKAIDWLKSYYW
EPQTKQIPFQRDGSADIRKEIKSKFRELASCLKVKKSTQPGSSAIKAKRSKKNITKTLKN
LVRLYSSFSSEVLSVLLEFLLKALDSSNLVELPKDCLVGEGMCTLLDDWKLVITKFSKKE
PEVLLMLLKAVLNMIDTHEAMKYEMGKHLISWEHGTENNQIDRLSSLFAWLVGQLKGLKP
LRCKQSAAESIASSIGMNLSNAILMEVLRKCLLVSSYGNKQLMGSALHLAQLMGDSSVMD
KLKKLSLLALSDPDVTQEMSPPPSLNSLLTQQDQSIHQATKKLDFVKLCRTKSKVAKRTD
GDVGSSGRWVVAKSWNPCPIGMLPRDLGSSGCLPVLECDDDGKKPVHASERKQIWEQKQC
SIREPGGDIPLSDYTSVQRTGSKREAGSEIYLLDKSSVKKMRETADSFESEGENVLLSKD
DKGCLMINGVWKKVGEEELLAIMSDVRILV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactgttaggattccaagacgaaacgatagccgttgttggcgatgaccaagag
aaatcaacatcgtcatcgtacggctacaaattagtgccgtggttaaactggaatgaatgg
gaatgtgttagagattctctcttctccggttctcctgagaagattcactctgctattacc
agaatatcaacatggcgaagcagaggatgtttaccggctgtgattgatgttacagcttcg
atcattgaagttcaacagaaggatcctttgtacagaaaggacttacctgatgatgctata
cattccgagcaaatgttggcaatgctatattgtatggctatcttgaggcttgtaaactgt
gttgttgagaagacaaggaagaaaacagaggtgtcgattgctgaggcagctggtgcaata
ggtattccgcgtacgctgatcgacattcgtcatgagggttctcaccgtgatcttcctgct
ctcgcacttgttcgggattctgctgttaaggcaattgattggttgaaatcttattattgg
gagcctcagacaaagcagattccattccaaagagatggaagtgctgacatcagaaaagaa
atcaaatctaaattccgcgaattagcttcctgcttgaaagttaagaagagtacccaacct
ggttcttcagcaatcaaagcaaaacgttctaagaagaatattaccaagactttgaaaaat
ctggttcgtctatattcttccttctcctcagaagtactgtcagttttgttggagttcttg
ctcaaggctttagattcttcaaatttggtggagcttccaaaagattgcctagttggcgaa
ggcatgtgtactttgttggatgactggaagcttgtaataacaaaattctcaaagaaggaa
ccagaagtactccttatgcttcttaaggctgttctaaatatgattgatactcacgaagcc
atgaaatatgaaatgggaaaacacctcatatcatgggagcatggaacagagaataaccaa
attgatcgactttcttccttgtttgcatggcttgttggacaactcaagggactaaagcct
cttcgctgtaaacaatctgcagctgaaagcatagcctcttcaataggaatgaatttatcc
aacgcaatcctgatggaggttctccgtaaatgccttctggtgtcctcatatggcaataag
cagcttatgggttcagcactgcatcttgcacagttgatgggtgatagctccgtgatggat
aaactcaaaaaactaagtttgctagctttatcagacccagatgttacccaagagatgtct
cctcccccgagtttgaatagccttcttacccagcaagatcaatctatccatcaggccacc
aagaagctagactttgtaaaactttgccgaacaaagagtaaagttgctaagagaacagat
ggtgatgtgggtagttcaggaagatgggttgtggcaaaatcatggaacccatgtccaatt
ggtatgttgcctcgtgaccttggatcttctggctgtcttcctgttcttgaatgtgatgac
gacggtaaaaagcctgtgcatgcatcagaaaggaagcagatctgggaacagaaacaatgt
agcataagagaacctggtggtgatattcctttatcagattacactagtgtccagaggact
ggtagcaagagagaagctggttctgaaatttatttattggataaatcaagtgtgaagaag
atgagagagacagcagacagttttgaatcagagggcgagaatgttttgttgtcaaaagat
gacaaaggttgtctaatgataaacggggtttggaagaaagtcggggaagaagagctactt
gctattatgtctgatgtgaggattttggtgtag
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