Populus nigra (Lombardy poplar): 133680026
Help
Entry
133680026 CDS
T10372
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133680026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133680026
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133680026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
133680026
NCBI-ProteinID:
XP_061958798
LinkDB
All DBs
Position
1:complement(6611619..6618305)
Genome browser
AA seq
686 aa
AA seq
DB search
MASEHQENSNAAQYLQYFTDEDSKTEEDEGEDDDDEEEEDVEDESPPDCKGMFLNLCGGG
SKRRGWSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWFA
ITVTALRCMTDVLYLWNMWLQLKIAKRPHGGGESGGDGERGGSRVAGPCSSALRYLKAKK
GFFFDLFVILPLPQIVLWVAIPSLLQKGSVTLLMNVFLIIFLFQYLPKIHYSVCLLRRMQ
SLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCIETPGCGLGLLS
CKEPIYYGTTRKVMEKARWAWADNKLARSMCLDSPDKYDYGAYKWTVQLVTNDSRLEKIL
FPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAM
QLKMRNIEWWMRKRHLPTGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLC
LDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVL
RDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVT
QHFRYTFVKERVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCS
SLGEDRLRLYTALLTSPKPNQEDFDF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgagcaccaagaaaactcaaatgctgcacagtacttgcagtattttacagat
gaagacagcaaaactgaagaagatgaaggtgaagatgatgatgatgaagaagaagaagat
gtggaggacgaaagtccaccagattgcaaaggcatgttcttgaatctgtgtggtggtggc
tctaaaagaagagggtggtctctaggacaggtgttagaccctagaggcaaatgggttcag
gaatggaatagggtttttctccttgtgtgtgccacaggactttttgtggaccctctcttc
ttctacgtcctctcaataagcgacacgtgcatgtgcctattcgtcgacgggtggtttgcc
atcacggtcacggctctccggtgcatgactgatgttttgtacctgtggaacatgtggttg
cagctgaaaatagccaagagaccacatggtggtggtgaaagtggtggagatggagaaaga
ggagggtcccgagttgccggcccttgctcctcggctctgaggtacttgaaggctaagaaa
ggatttttctttgatctcttcgttattctgcctctaccccagattgtgttatgggtggca
attccatctctgttgcaaaagggatcagtaacgctactgatgaacgtgtttctgatcatt
ttcctcttccaatatctcccaaaaatacactattccgtctgcctccttcgacgcatgcaa
agtctctctggctatatatttggaactgtttggtggggaatcgctctcaacatgattgct
tactttgttgcatcacatgcagcaggagcatgttggtacttgctgggaattcaaagggct
gcaaaatgcttgaaagaacaatgcatagaaacaccgggttgtggcctgggattgttgtct
tgcaaagagcctatttactatggaacgacaagaaaagtgatggagaaggcgagatgggca
tgggcggataacaagctagcaagatctatgtgcttagacagccctgataaatatgattat
ggtgcatataaatggaccgttcagcttgttaccaatgacagcagattagagaagatactc
tttcctatcttctggggcctaatgactctcagcacttttgggaacctggagagcacaact
gagtggttagaagttgttttcaacatcattgttctaacgagtgggctgctcttggtcacc
atgttgattgggaatatcaaggtgttcttgcatgcaaccacatcaaagaagcaagcaatg
caattgaagatgaggaatatagagtggtggatgaggaaaaggcacttgcctacggggttc
cggcagagagtgcgcaactacgagcggcaacggtgggcagcgatgaggggtgttgatgaa
tgtgagatgatccggaacctccctgagggccttaggagggacatcaagtaccatctttgc
ctggatttggtgagacaggtaccactgttccaacacatggatgatttggtcctcgagaac
atttgtgaccgtgtgaagtctctcatcttcacaaagggagaaacaattacaagggaggga
gatcctgtccaaagaatgttatttgtagtaaggggacatctccaaagtagccaagttctc
agagacggtgtcaaaagctgttgcatgctagggcctgggaatttcagtggtgatgagctc
ttatcatggtgcctgagaagaccctttatcgaacgtttgccaccatcttcatcaacgttg
gtcactctcgaaaccaccgaggcttttggcctagaagctgaagacgtgaaatatgtgacg
caacatttcaggtacacattcgttaaggaaagagttaagagaagcgcaaggtattattca
cctggatggagaacttgggctgctgtggctattcagctggcttggagaaggtataagcat
cggttaacgcttacctcattgtcatttataaggcctagaagacctttgtcaaggtgttct
tctttgggagaggataggcttaggctctatactgctctcttaacttcaccgaagccgaat
caagaagattttgacttttga
DBGET
integrated database retrieval system
