KEGG   Populus nigra (Lombardy poplar): 133680124
Entry
133680124         CDS       T10372                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00040  Pentose and glucuronate interconversions
pnz01100  Metabolic pathways
Module
pnz_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    133680124
Enzymes [BR:pnz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     133680124
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim ORF6C FlgE_D2 NosD
Other DBs
NCBI-GeneID: 133680124
NCBI-ProteinID: XP_061958929
LinkDB
Position
19:5420437..5422160
AA seq 380 aa
MGFTRILFLTLLFVWAADVQCQNVRIFNVKKYGAIPDSKTENSKAFLEAWKNACKWNGKA
VVLVPAGTYLLDSVKFEGECKGYMIFKLKGNVMAASKLKDINQWITFKYVNGLTVAGSGT
FDGQGYKSLRLEFIRNGKLQNIRSINSQNAHVSIFASSNLNITNVKLSAPQDSPNTDGIK
ISSSEEIRITRTSISTGDDCVAILNGSKNTHISQVFCGPGHGISVGSMGGNTLIDNKDIV
VGLAVTNSTFTNTSNGLRIKTWASRYEGLASGFTYEDIIMNDVEHPIIIDQQYCPSSSCD
SKTASRIQIRDITYSNIRGTSKSKAAVTLNCSSIVPCKNIVLKDIRLVYTGNEGPASSIC
SNVHGYSYGLQNPPPCFRSA
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggttttactcggattctgttcttgacactgctttttgtttgggctgccgatgttcaa
tgtcaaaacgtcaggattttcaacgtgaagaaatatggtgcaatccctgatagcaagact
gagaatagcaaggcattcttggaagcatggaaaaatgcatgtaaatggaatggaaaggct
gtggttttggtgccagcaggaacatacctgctagactcggtgaaatttgagggcgaatgc
aagggttacatgatatttaagttgaaagggaatgtaatggccgcaagcaaactgaaggat
attaaccaatggattactttcaaatatgttaatggcttaactgtggccggtagtggaacc
ttcgatggccaaggatacaagtcattaaggcttgaattcatcagaaatgggaaactgcaa
aacataagatcaatcaacagccaaaatgcccatgtttccatctttgccagcagcaacttg
aatatcactaatgtcaagttgtctgctcctcaagatagccctaatactgatgggatcaag
attagttcttcagaagaaatcaggattacacgcacatcaatcagtacaggagatgattgt
gttgccatactcaatgggagtaaaaacactcacatttctcaagttttctgtggccctgga
catggaatcagtgttgggagtatgggagggaatacacttattgataataaagacattgtg
gtggggttggccgtgacgaactccacttttaccaataccagcaatggtttaagaatcaaa
acatgggcatctcgctatgaaggtcttgcttctggtttcacttacgaagacatcataatg
aacgacgtcgaacatcccattattattgatcagcaatattgccctagttcttcctgtgat
tccaagactgcttcacgtattcaaatcagggatattacatacagcaacattaggggtact
tcgaagtcgaaggcagcagtgacattaaattgcagcagcattgttccatgcaagaatata
gtgctgaaggatatcagattggtgtatacaggaaatgaaggtcctgcaagttcaatatgt
tctaatgtccatggctactcttatggccttcaaaacccacccccatgctttcgctcggct
tag

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