Populus nigra (Lombardy poplar): 133680262
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Entry
133680262 CDS
T10372
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133680262
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133680262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
DUF7351
Zn_Ribbon_TF
DUF1033
Motif
Other DBs
NCBI-GeneID:
133680262
NCBI-ProteinID:
XP_061959068
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Position
19:5462347..5475677
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AA seq
609 aa
AA seq
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MRSCGSCREKVRAYYDENGIVSCSRCGKVLEFSYLSAEASFVKTRSGESHVAGSFVRSVE
SENASRERLYERARDDMLNIKNGLGMGENLGIVNQAMVYYRIAVERNFTRGRRTDQVQAA
CLYIACRENRKPYLLIDFSIYLQINIYVLGAVFLQLCKVLNLTEHAICQKLHDPSIFIHK
YTASLSGGKNKEISDDALTIIASMNYHWIQTGRTPSALWGAALYISALSHGLNCSKSDIL
RLVHVCGKTLSKRLVEFENTESGSLTIEELNAKVEELKESSLPQRNFGEPSSSKELLCQH
KGTNRPPFGFGLCKDCYAIVIGFDGGTDPPAFQNAESQRMKKSSIRHSVSDSNLFAKELN
NQCESRDEERPTREPESAGVATGHLASDSDKLHGVGDMSSKAFDESDGFSDIDDAEVDSY
LHNEEEKRYKKIIWEEMNREYLQEQAAKEAAAATLKKAWEENFKNCPEDLQAAKKLDAAV
KADLAKSKKEIQQKRASEARNLAPAKSAAEAVHRMLTKKRLGSKINYDVLEKLFEDSEAK
DAKKPRTESASDSADKVLHTDGKDCRLDYTNENDGLGSLDGNGNDAVEETSDFLYYENCS
DDDYGNSLW
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttgtggctcttgtcgagaaaaggttcgtgcatattatgacgaaaatggcatc
gtgtcatgtagtcgctgtgggaaagttctggagttcagttatctttcagctgaagcctct
tttgtaaaaactaggtcgggggagagtcatgtggcaggttcgtttgttaggtctgttgaa
agcgaaaacgcttcacgggaaaggttgtatgaaagagcacgtgatgacatgctaaacata
aaaaatggcttaggcatgggtgaaaatcttggcatagttaaccaagctatggtgtattac
agaatagcagttgaacggaatttcactaggggccgtaggacagatcaagtacaggcggct
tgtctttacattgcatgtcgggaaaacagaaaaccatatcttcttattgatttttctatt
tacttgcagataaatatttatgtactaggtgctgtatttttgcagctctgcaaagtttta
aatcttaccgagcatgccatttgtcagaaacttcatgatccttccattttcatacacaaa
tatacagctagtttatcaggaggaaaaaacaaggaaatttctgatgatgcattgaccatt
atagcaagtatgaattaccattggatacagacagggagaacgcccagtgcattgtggggt
gcagcattatatatatctgcactttcacatggcctcaactgctccaaatctgacatctta
aggttggtgcatgtttgcgggaaaacactgtcaaagagattggttgaatttgagaataca
gagtctgggagcttaacgattgaggaactgaatgcaaaggtggaggaactgaaagaaagt
tcattgccacaaagaaattttggggagccatctagttcaaaagagttgctatgtcaacac
aagggtacaaatagacctccttttggatttggactttgtaaagattgctatgcaattgtt
ataggatttgatggaggaacagatcctccagctttccaaaatgctgagagtcaaagaatg
aaaaaatcatctattagacatagtgtgagtgactcaaatttgtttgcaaaagaattgaac
aaccaatgcgagagcagagatgaagaaaggccaacacgcgagcctgaaagtgctggagtt
gctacagggcatttagccagtgattctgataaactgcatggtgtgggtgatatgagttct
aaagcttttgacgagtcagatggcttttctgatattgatgatgctgaggttgatagctac
cttcataacgaggaggaaaaacgttacaaaaaaatcatttgggaagaaatgaaccgagag
tatcttcaggaacaggcagccaaagaagcagccgcggcgactcttaagaaagcctgggag
gagaatttcaagaattgccctgaggacttgcaagctgcaaagaaacttgatgctgcagta
aaagctgatttagcaaaatctaaaaaggaaattcaacaaaagcgagcttccgaagctagg
aacttggctcccgctaaatctgctgcagaagctgtccatcgaatgctaactaagaagaga
ctcggttcgaaaatcaactatgatgtgctggagaaactctttgaggattctgaggccaag
gacgccaagaaaccgcgaacagaatcagcttctgactctgctgacaaggtgctccataca
gacggcaaagattgtcgattagattatacgaatgaaaatgatggtttggggtcactggat
ggaaacggaaatgatgctgttgaagaaacaagtgattttctttattatgaaaattgttct
gatgatgattatggtaacagtttatggtaa
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