KEGG   Populus nigra (Lombardy poplar): 133680427
Entry
133680427         CDS       T10372                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    133680427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133680427
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    133680427
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 LIG3_BRCT IMS_HHH POLH-Rev1_HhH PTCB-BRCT
Other DBs
NCBI-GeneID: 133680427
NCBI-ProteinID: XP_061959355
LinkDB
Position
19:9223693..9232548
AA seq 1125 aa
MSFDSSRSSSANSSRKSKRGLNNSNSSNNKNSKQKTPGMGWGANSLSSSRSSSRSSPFSN
FGSYMVEKNRKLQHQFEAEASTSHHSGSSSGKLIFQGVSIFIDGFTIPSNQELRAYMLKY
GGRFANYFSRHQVTHIICSSLPDSKIKNLRSFSGGLPVVKPTWILDSIVANKLLSWIPYQ
LNQLASNQPKLSAFFTLKSNPVPENVLTDEVCQVNLDPILKGGTTKDAYISEVDEPVRFA
EQAGKLLDDPNHQLKELNSSSGKSAEVKMAEFGSSDAEYGNSVNSKHQSGPDQFSSSVSG
YCLHNQSSDGSLSSEPSGPSNQRHSTLGDPNFVENYFKSSRLHFIGTWRSRYRKRFPSSS
SEFKRRSSDLNTSDNSNKSTIIHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEI
SSANYPARNYGVKAGIFVRDAKALCPQLVIFPYNFKAYEEVADQLYNILHKHCHKVQAIS
CDEAFLDITEKDMGDPELLASTIRKEIFDTTGCTASAGIAGNMLMARLATRSAKPNGQCH
IPSVSVDEYLHKLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKDFGLKTGEML
WNYSRGVDNRLVGNIQESKTIGAEVNWGVRFKDLQDSQCFLLNLCKEVSFRLQGCRLQGR
TFTLKIKKTRKDADEPAKYMGCGDCENLSHSMTVPNATDDVEVLQRITKQLFGSFCLDVK
DIRGVGLQVSKLENADPSKQVLERNSLRSWLTSSSATTEKGCSVNSMDKERARIDSEVKN
MIGTSGQLFPDHTGFSAQVDNDSSSGISAPPPLSHLDMGVVKSLPAELFSELNEIYGGKL
TDFIAKSSVASENTNSYPSTPSAEGQELAVDGGEGPLASDMIPLDFIMVENRAKQHMIEE
AQAAPSGAVLQNEAICSVSPNNTDLMPLSLSQVDVSVLQQLPEELRGDILGQLPAHRKQE
LTSNAGSHPLSENPEGALIIKITENQSNSIASVLNTNLWIGSPPWWVDKFTVSSSLILKT
LAELYYKLGSTGSLSPILQRIISECLYPLDENSDACDEEATYDLCELFKQYVKLKMELDL
EEIYVCFCLLRRLTTKSKFLLQVYNIVFPYLQASVGENYGGGLHI
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgagttttgattcttcgcgatcctcctctgccaattcaagtcgaaaatcaaagagaggt
ttgaataattcgaattcttcaaacaataaaaatagcaagcaaaaaacccccggcatgggt
tggggtgccaactcactctcctcctctcgctcctcctctcgcagctctcctttctccaat
ttcggcagttatatggtagagaagaataggaagcttcaacatcagtttgaagcagaggct
tccacttctcaccattctggttcgagttccgggaagctgatttttcaaggagtctctatt
tttattgatggtttcacaattccttcgaaccaggaactgcgagcttacatgttgaagtat
ggtgggcgatttgcgaattacttttctaggcatcaagttacgcatataatctgtagcagt
cttcccgatagtaaaatcaagaacctgaggtcatttagtggtgggctcccagtggtcaaa
cctacatggattttggattctattgttgctaacaaacttttgagttggattccttaccag
ctcaaccagcttgctagtaaccaaccaaaattatcagccttctttaccctgaaaagtaac
ccagtcccagagaatgttttgactgatgaagtttgtcaagtgaacctggatccaattttg
aagggtggcaccacaaaggatgcgtatatttccgaagtggatgaacctgtgagatttgcc
gagcaagccggcaaactacttgatgatcctaatcatcaactcaaggagctaaatagcagt
agtggaaaatctgcagaagtaaagatggcagaatttggtagtagtgatgcagaatatgga
aacagtgtaaacagcaagcatcaatctggtccagatcaattttcttcgtcagttagtggc
tattgcttacacaatcaaagttcggatggatcactgagttcagaacctagtgggccttca
aatcaacgtcattcaactcttggggatcccaattttgtggagaattactttaagagttca
aggctgcacttcataggaacctggagaagtcggtaccgtaagcgttttcctagctcatca
agtgagtttaagcgcagaagctcagatctcaacacctctgataattctaacaagtcaact
attatccatgttgacatggactgtttttttgtttctgtagtcatccggaatcatccagag
ttacatgataagcctgtagcagtatgccattctgacaacccaaaaggaacagctgaaatt
tcatcagcaaactaccctgcccgaaactatggagttaaggctgggatttttgttagagat
gccaaagccctttgtccgcaacttgtcattttcccttacaatttcaaagcttatgaagaa
gtagctgatcagctttacaacatcttgcataagcactgccacaaagtgcaggccataagc
tgtgatgaagcatttttagacatcacggaaaaagatatgggagatcctgagcttttagct
tcaacaataaggaaagagatttttgacactacaggatgcactgcaagtgctgggatagct
gggaatatgctcatggctcgacttgccactagaagtgctaaacccaatggtcaatgccat
atcccttctgtaagtgtggatgagtatctacacaaacttccaattaaggcacttccagga
atagggcatgttttggaggagaagttgaagaagcaaaatgtttggacttgtggacagtta
cgtctgatatccaaggaatctcttcaaaaggattttggactgaaaactggagaaatgttg
tggaactatagtagaggagttgataatagactggttggtaacattcaggaaagcaagact
ataggtgctgaagtcaactggggtgtcaggttcaaggatttgcaagacagtcaatgtttc
ctattaaatctttgcaaggaggtttcgttccgtttgcaaggatgtagattgcaagggcgc
acatttacccttaagataaagaagacaagaaaagatgccgatgaacctgctaaatatatg
ggctgcggggactgtgagaatctgagccactccatgacagttccaaatgctactgatgat
gttgaagttcttcaaaggataacaaagcagctctttgggtctttctgcttggatgtcaag
gacattcggggtgttggcttgcaagtttccaagcttgaaaatgcagacccttctaaacaa
gtgcttgaaagaaactctttgaggtcatggctcacctcttcctcagcaactactgaaaaa
gggtgtagcgtcaacagtatggacaaagagagggctaggatagattctgaggtgaagaac
atgattggaacttcaggtcaattatttcctgaccacactgggttttctgctcaagtggac
aacgattcatcaagtggtatttcagctccaccacctttatctcatcttgatatgggagtt
gtcaagagtcttccagctgaacttttttctgagttaaatgaaatttatggagggaagtta
acagatttcattgctaaaagcagtgttgcaagtgaaaacaccaacagttatcctagcacc
ccttcagctgaagggcaagagcttgcagttgatggtggcgagggacctcttgcatctgat
atgattccccttgacttcataatggtggaaaatagggcaaaacagcatatgattgaggaa
gcacaagcagcgccttctggggctgtattgcagaatgaggccatttgctctgtaagccct
aacaacactgatttgatgcctttatctctaagtcaagtggatgtatcagtgttacaacaa
ttgccagaagaattgagaggtgacatacttggacagcttcctgcgcacagaaaacaagag
ttgacttcaaatgctggatcacaccctctttcagaaaatcctgagggagctttgattatt
aaaatcactgagaatcaatcaaattccattgcctctgttttgaatactaatctttggatt
gggagccccccatggtgggttgataagttcacagtcagcagcagcttgatattaaagact
ttggcagagttgtattacaaactgggatcaactggaagtctatctcctatactgcaacgc
ataatttctgaatgtctatatcctttggatgaaaatagtgatgcttgtgatgaggaagct
acatatgatttgtgtgagcttttcaagcaatatgttaaactaaagatggagctagacctc
gaagaaatttatgtttgtttctgtcttcttagaaggttgacgaccaagtcgaaattcctc
ctacaagtatacaatattgtctttccttaccttcaggcatctgttggagaaaattatgga
ggaggtttgcatatttaa

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