KEGG   Populus nigra (Lombardy poplar): 133680437
Entry
133680437         CDS       T10372                                 
Name
(RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00860  Porphyrin metabolism
pnz00970  Aminoacyl-tRNA biosynthesis
pnz01100  Metabolic pathways
pnz01110  Biosynthesis of secondary metabolites
pnz01240  Biosynthesis of cofactors
Module
pnz_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    133680437
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    133680437
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pnz01007]
    133680437
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pnz03016]
    133680437
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pnz02048]
    133680437
Enzymes [BR:pnz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     133680437
Amino acid related enzymes [BR:pnz01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   133680437
Transfer RNA biogenesis [BR:pnz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    133680437
 Prokaryotic type
   Other AARSs
    133680437
Prokaryotic defense system [BR:pnz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    133680437
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 133680437
NCBI-ProteinID: XP_061959378
LinkDB
Position
19:13663116..13667769
AA seq 574 aa
MANSIIAGTPWIRIRVIPEISFPILRSSSSLYNHKVSCLFPTRRRFSVSAIASTEKEQVR
VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLRDLSWL
GLDWDEGPGVGGDYGPYRQSERNSLYKHHAEKLVESGHVYRCFCSNEELEQMKEIAKLKQ
LPPVYTGKWANAMDDEVQEELAKGTPYTYRFRVPKEGRLTINDLIRGEVSWNYDTLGDFV
IMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPHFAHVSLIL
APDRSKLSKRHGATSVGQYREMGYLPQAMVNYLALLGWGDGTENEFFTLEQLVEKFSIGR
VNKNGAVFDSTKLRWMNGQHLRALPSDKLNKLVGERWKSSGILAESEGPFIEEAVLLLKD
GIELVTDSDKVLSNLLSYPLHATLSSPEGKVMIQNKLSEVSSGLLAAYDSGELLNALEEG
HSGWQKWVKNFGKTMKLKGKSLFMPLRVLLTGKLHGPDMGSSIILLHQAGTGDMVSSQAE
FVTLKERFGVLREIDWEALNKDQPPLEPAAIAAN
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggcgaatagtataatagcagggacgccatggataagaatcagggttatccctgaaatt
tcgtttcccattctacgttcttcatcctccctttacaaccacaaagtctcttgccttttt
ccaactagaagacgattttcagtctctgccattgctagtactgaaaaagaacaggttaga
gtccgttttgctccctcgcctactggaaacctccatgttggtggtgctagaactgctctc
tttaattatctcttcgctaggtctaaaggcgggaaatttgtgttgaggattgaggatact
gacttggagaggtcgactaaagaatccgaggaggcagtgcttcgggatctttcctggctt
ggtcttgactgggatgaaggtcctggggttggtggagactatggtccatatcggcaatca
gagaggaattctctctataagcatcatgctgagaagcttgtagaatctggtcatgtttat
cgctgcttctgctctaatgaggaacttgagcaaatgaaggagattgcaaaattgaagcaa
ctgcctccagtatacacaggaaagtgggctaatgcaatggatgatgaagtacaggaagag
ctggcaaagggaactccatacacgtatagatttcgtgtccctaaggaagggcgtttgaca
attaatgatcttattcggggcgaggttagttggaattatgacacacttggagattttgtg
atcatgaggagcaatggacaacctgtgtacaacttttgtgtcactgttgatgatgctacc
atggctatctcacatgttattagagctgaagagcatttaccaaatactctcaggcaagca
ctaatatacaaggcccttggattccccatgcctcactttgcacatgtttctttaattctt
gcacctgatagaagtaaattatcaaaacgacatggtgcaacttcagtgggtcagtacagg
gagatgggttatctgccccaggcaatggtgaattacttggcacttttaggttggggtgat
ggaacagaaaatgaattttttacccttgagcaacttgttgaaaaattctcaattggtcgt
gttaacaaaaacggcgctgtttttgattctaccaagttgaggtggatgaatggccagcat
ttaagagcacttccatcagataaactgaataaacttgttggtgaacgctggaaaagcagt
ggcattcttgcagagtcagaaggaccatttatagaagaggcagttctgcttctcaaggat
gggattgagttggtaactgattcagacaaagtgctatcaaatttgctatcatatccctta
catgctactttatcaagtcctgaaggtaaagttatgatacaaaataagctttctgaggtc
tcatccgggttgttagctgcatatgacagtggcgaactccttaatgccctggaagaaggc
cattctggttggcagaagtgggtaaagaattttggaaaaacaatgaagctgaaggggaaa
tctcttttcatgcctctccgagtgttgctaactggaaaactccacggtcctgacatgggc
tctagcataatcctgctccatcaagctggaactggggatatggtttcttcccaagctgag
tttgtgacattgaaggagaggtttggagtactgagggaaatagactgggaagcactgaac
aaggatcaacctcctttggaacccgcagctatagcagcaaattga

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