Populus nigra (Lombardy poplar): 133680474
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Entry
133680474 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133680474 isoform X1
KO
K23288
syndetin
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133680474
Membrane trafficking [BR:
pnz04131
]
Protein recycling
Others
EARP complex
133680474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
133680474
NCBI-ProteinID:
XP_061959426
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Position
19:1590151..1615066
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AA seq
1101 aa
AA seq
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MQPNLFPFGSVFGNPFLLNADLGEDSVRFGFESSRLFFLVPFLLLQGGGGGGDGGGMDLS
KVGEKILSSVRSARSLGLLPPTVDRPEVPARAAAAAAVARVLAGMPPHQRFNLPSSSEEL
RSIYGSRIQGHMVEELEEDFYEEDFDPVRHILEHVPSEENELMYFEEQATLRIAQLDRVA
ERLSHHVMEHHEVMVKGMNLVREVEKDLKVANVICMNGRRHLTSSMNEVSRDLVVNSNSK
KKQALLDMLPVLTELRRALDMQIALESLVEEGNYCKAFQVLSEYLQLLDSFSGLSAIQEM
SRGVEVWLGRTLQKLDALLLGVCEEFKEESYITVVDAYALIGDISGLAEKLQSFFMQEVL
SESHSVLKIIVHEDLEIQMQNNRLTYSDLCHQIPESKFRTCLLRTLAILFRLMCSYHEIM
SFQLESKDLLCQTSDMKQDSLGSNGSPPQSVDGMLGSSSIEESTTTFMYQDCNFDVDETK
SNGGEAPSSGSPWYHLRKEATTFVSQTLQRGRKNLWQLTTSRVSVLLSSAVFSSMSVHQF
LKNYDDLNVFILAGEAFCGVEAIEFRQKLKAVCENYLLAFHRQNIHALKMVLEKESWLKL
PPDTVQAISFAGLVGDGAALIVPSHDNSSNAKLHHSNKSVKSVDANSKKSGFSSWIRSGN
PFSPKLIPTSVEGHSSSLLNGATAGEYDEHANDTVSPQGNGASHKNGMPVSEDENEDLLA
DFIDEDSQLPSRISKPKAPKSNSSHCKTDEISAQTGSSLCLLRSMDKYARFMQKLEIVNV
EVFKGICQLFEIFFYFVFETFAQQTSNSSGKSDSLNYRLKTAISRITQDCDQWIKPQLTP
VSSSSPTSSSTHIHGDVTPASPSNHLLATSFGLKERCAAADAISLVAQILHRSKTHLQSM
LLQNNPATVEDFFVILVDSVPDLTEHIHRTTARLLLHINGYVDRIANAKWEVKELGLEHN
GYVDLLLGEFKHYKTRLAHGGIHKEVQDRLLEYGLEIVAETLIEGLSRVKRCSNEGRALM
SLDLQVLINGLQHFVPVNVKPKLQTVETFIKAYYLPETEYVHWARAHPEYRKNQIVGLIN
LVATMKGWKRKTRLEVIEKIE
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgttcccattcggtagcgtattcgggaacccgtttttgttaaatgct
gatttaggagaagacagtgttcgttttggatttgagagttctagattgttctttttggtc
ccctttttgttgttgcaaggcggaggcggaggaggagacggcggcggaatggatttatca
aaagttggtgagaagattttgagctctgttcgctctgctagatctcttggtcttttgcct
cccaccgttgatcgcccggaggttccagcccgagctgcagcagctgctgctgttgctcgt
gtgcttgcaggaatgcctcctcatcagcggtttaatcttccttcaagttctgaagaacta
cgatcaatatacggaagcagaatacaaggtcacatggtggaggagctggaggaagacttc
tatgaagaggattttgatccagttaggcatattctagagcatgttccatctgaagaaaac
gaattaatgtattttgaggaacaggccactcttagaatagctcaactagatagagtagca
gaacgtttatcccatcatgttatggagcatcatgaagtaatggtgaaggggatgaatttg
gtgagggaagtagagaaagatttaaaggttgcaaatgtcatctgcatgaatggtagaagg
cacctgacttcatcaatgaatgaggtttcaagggatcttgtagtgaattctaattccaaa
aagaaacaagctctcctggacatgcttccagtattaactgagcttcgtcgtgcattagac
atgcaaatagcacttgaatccctggttgaagaaggaaattactgcaaggcgttccaagtc
ctatctgagtatttgcagctattagacagtttctcagggctttcagcaatacaggagatg
agccgtggggttgaggtttggttggggagaacccttcaaaagctggatgcacttttgctg
ggagtgtgcgaggagttcaaggaggagagttacataacagtagttgatgcatatgcttta
attggagatatctctggtcttgctgaaaagttgcagagcttcttcatgcaggaggtttta
tcggaatcccactctgtgttgaagattattgtacatgaggacctggaaatacagatgcag
aacaatagacttacctacagtgatctatgccatcagatacctgaatctaagttcaggacg
tgtttattgagaacattagctatcttattcaggttgatgtgttcctatcatgaaataatg
agcttccaactggagagtaaggatttgttatgtcaaacatctgatatgaagcaagattcc
ttaggaagcaatggatctcctcctcaatctgtagatggaatgcttggttcatcttctatc
gaggaatctacaacaacttttatgtatcaagattgcaattttgatgtagatgaaactaaa
agtaatggtggtgaagcaccaagcagtggatccccttggtatcatctgcgaaaagaggcg
acaacatttgtttcacaaactcttcagagaggacgaaagaatctttggcagcttacaaca
agcagagtatcagtattgctttcttctgcagtttttagctctatgagtgtgcaccaattc
ttgaaaaattatgatgatttgaatgtattcatcttggctggggaagccttctgtggagtt
gaagcaattgagttcagacagaagttgaaggctgtatgtgagaattatttgctggcattt
catcggcaaaatattcatgcactcaaaatggttttggaaaaggaaagttggctgaaattg
ccaccagatactgtacaagcaattagttttgctgggcttgttggtgatggggcagccctg
atagttccatctcatgataactcctctaatgcaaaattgcatcattctaacaaatcagtg
aaatctgttgatgccaatagcaagaaaagtggattttcctcttggattagaagtggaaat
ccattttcgccaaaattaatccccacttcagtagaaggtcacagttcttccctgcttaat
ggggcaaccgccggtgaatatgatgaacatgcaaatgatacggtgtctccccaaggtaat
ggtgcaagtcataaaaatggaatgcccgtttcagaagatgaaaatgaagatctacttgca
gacttcatcgatgaggacagtcaactcccaagtcgaatttcaaaaccaaaagctcctaaa
agtaactcttcacattgtaaaactgatgaaatatctgcacagacaggatcatctctttgt
cttctcaggtcaatggacaaatatgcaaggttcatgcagaaactagaaatagtaaatgtt
gaggtttttaagggtatatgccagttgtttgagattttcttctattttgtgtttgaaaca
tttgctcagcagacctctaattcaagtggaaaatctgactctctcaattatcggctgaag
acagccatatccagaattacacaagattgtgaccaatggataaaaccccagctgacccct
gtttcatcctcttcacccacatcttcgagcacacatattcatggagatgtaacacctgct
agtccttcaaatcatttgctagccacatcctttggtctcaaggaaagatgtgctgctgct
gatgccatatctcttgttgctcaaatattacacagatctaaaactcatcttcagtcaatg
cttcttcaaaataatccagctacagtggaagatttttttgtcatactggtggattctgta
ccagatcttacagagcacatacacaggacaactgcaagattacttcttcatatcaacggg
tatgttgatcggattgctaatgctaaatgggaagtaaaagagcttgggctagagcacaat
gggtatgttgatttactgttgggagaatttaagcactataaaacgaggcttgcacatggt
ggtattcacaaagaggttcaagaccgccttttagaatatggtctcgaaattgtcgctgaa
accctcattgaaggtctatcacgggtgaagaggtgtagtaatgaaggacgagcccttatg
tcattagatcttcaggtattgatcaatggcctacaacattttgtccctgtaaatgtcaag
ccaaaattacaaacggttgaaactttcataaaggcttactatcttccagaaactgagtat
gtacactgggctcgagctcacccggaatacagaaaaaatcaaattgttgggttgatcaac
ctcgttgctacaatgaaaggttggaagaggaaaaccaggttggaagtcatagagaaaatc
gagtga
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