KEGG   Populus nigra (Lombardy poplar): 133680677
Entry
133680677         CDS       T10372                                 
Name
(RefSeq) ras-related protein RABE1c-like
  KO
K07901  Ras-related protein Rab-8A
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133680677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133680677
   03036 Chromosome and associated proteins [BR:pnz03036]
    133680677
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133680677
   04031 GTP-binding proteins [BR:pnz04031]
    133680677
Membrane trafficking [BR:pnz04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    133680677
 Autophagy
  Other autophagy associated proteins
    133680677
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    133680677
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133680677
  Exosomal proteins of other body fluids (saliva and urine)
   133680677
  Exosomal proteins of colorectal cancer cells
   133680677
GTP-binding proteins [BR:pnz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    133680677
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA C2c1_Nuc-II FeoB_N AAA_29 PduV-EutP MCM AAA_22 AAA_16
Other DBs
NCBI-GeneID: 133680677
NCBI-ProteinID: XP_061959696
LinkDB
Position
19:complement(4563721..4567213)
AA seq 215 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQR
LSDTDTKAEPATSKIHLDQASGAGPAAQKSACCGS
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctgctccccctgctagagcccgagccgattatgactatctcattaagcttctcttg
atcggcgatagcggtgtgggcaagagttgccttcttttgcgtttctctgatggttccttc
acaactagttttatcactaccattggtattgactttaagataagaaccattgagcttgat
ggcaaaaggattaagcttcaaatttgggatacagctgggcaggagcggttccgaacaatc
acaactgcttattatcgtggagctatgggtattttgctggtctatgatgttactgatgaa
tcatctttcaacaacattaggaattggattcgcaacattgagcaacatgcttctgataat
gttaacaagatattggtagggaacaaggctgacatggatgaaagcaaacgggctgtacca
acatccaagggccaagcactcgctgatgagtacgggatcaaattctttgaaactagtgca
aagacgaatcaaaatgtggagcaagttttcttttcaatagcaagggatataaagcaaagg
ctttctgacactgacaccaaggctgagcctgcaacatcaaagattcatctagaccaggcg
tctggagcaggtccagctgcccagaaatcagcttgttgcggttcttaa

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