Populus nigra (Lombardy poplar): 133680764
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Entry
133680764 CDS
T10372
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133680764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133680764
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133680764
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
133680764
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133680764
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133680764
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
Ank_5
BAR
PH
Ank_2
Ank_3
Ank_4
PH_11
BAR_2
ANK_LRRK2
PH_20
TPR_21
PH_8
Motif
Other DBs
NCBI-GeneID:
133680764
NCBI-ProteinID:
XP_061959731
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Position
1:44706766..44717221
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AA seq
830 aa
AA seq
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MHFTKLDDSPMFRKQMQSLEEDAESLRERSLKFYKGCRKYTEGLGEAYDGDIGFASALET
FGGGHNDPISLAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQYVNIDLHEVKE
ARKRFDKASLLYDQAREKFLSLRKGTRSDIATLLEEELHNARAAFEQARFNLVTAISNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLTYAQQSRERSNYEQAALSER
MQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSSLRGDWKRRFFVLDNRGMLYYYRKQCSKPSGSGGQLSGQRNSSELGSGLLGRWLSS
HHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLSASPLGSSHHRSASESSSFESTDFDPSAVDEYTSERSLAA
LHERALRSSQQQRASAEKPIDVLQRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHR
NLGVHISKVRSLTLDVKVWELSVISLFQSLGNAFANSVWEELLQSRSALQAELIPSGSFK
SDKPQLLFISKPNPADSISIKEKFIHAKYAEKAFVRKPRDHQSTRSVAQQIWEAVRANDK
KAVYRLIVNHEADVSAVYEQASCSSSLTRAKTVLLQELANPDNCCSSYSTGNSLDRSSTI
SLNFPGTTEGQTLEDVDGCTLLHLACETADIGMLELLLQYGANINSTDSGGQTPLHRCIL
RGEAGLAKMLLTRGADPRAVNGKDKTPLELAVESKFDESEVLALLSDSNG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcacaaagctcgatgactctcctatgtttcgcaagcagatgcaatcactggaa
gaagatgccgaatcattgagggagagaagtttaaagttctacaaaggatgtagaaaatat
actgaagggcttggagaggcatatgatggggacattggttttgccagtgctttagaaact
tttggtggagggcataatgatcctattagtttggcttttggaggccctgttatgaccaaa
ttcaccatagccttgagagaaattgggacatacaaggaagttctccgatcccaggttgag
cacatgctgaatgacagattactacaatatgtcaacattgatttgcatgaggtgaaggaa
gcaaggaagcgttttgacaaggctagccttctttacgaccaggctcgtgagaagtttctg
tcactgaggaaaggcacgaggtctgatatagctactcttttagaggaggagcttcataat
gcaagggctgcgtttgagcaagctcgctttaatttagtaactgctatttctaatgtcgaa
gcaaaaaagaggttcgaatttttggaagcagtcagtgggacaatggatgctcatctacgt
tacttcaaacagggctatgagcttttgcatcaaatggagccatacattcatcaggttttg
acttatgctcaacaatcaagagaaaggtctaactatgagcaggcagctctcagtgagagg
atgcaagagtacaagaggcagattgatcgtgagagtagatggtcttccaatggttctaat
ggatctccaaatggagatggtatacaagccattggtagaagttcacacaaaatgatagag
gctgttatgcaatctgctgcaaaggggaaggttcaaactattagacaaggttatctgtca
aaacgatcctctagcttgagaggtgactggaaaagaagattttttgttctcgataaccga
ggaatgctttattactatcgcaaacagtgcagcaaaccttctggttctgggggtcaactt
tctggtcaaaggaatagctctgagcttggatctggattgttgggtcggtggctttcttct
caccatcatggtggagtgcatgatgaaaagtctgtcgctcatcacaccgtgaaccttctt
acatcaacaatcaaagttgatgctgatcagtcagatctgcgattttgcttcaggatcatt
tcaccaacaaagaactacacattgcaggcagagagtgcactggatcaaatggattggatt
gaaaagataactggggttattgcttcactacttagctctcaagcacctgagaggtgtctc
tcggctagtcccctgggaagcagtcatcatcggtctgccagtgagagtagttcatttgaa
agtactgattttgatccttctgctgtcgatgaatatacatctgagaggagccttgccgct
ttacatgaacgagcattgagaagttcacaacagcagcgagccagtgcagagaagccgatt
gatgtgttgcaaagagtttgtggaaatgataaatgtgctgattgtggtgcccctgaacca
gattgggcatctttaaatcttggagttcttgtttgcattgaatgttctggtgttcaccgt
aatcttggtgtgcatatatcgaaggtaaggtcacttacacttgatgtcaaggtgtgggag
ctttcggtcataagtttgttccagtctctcggaaatgcctttgctaactcagtctgggag
gaattattgcagtcaagaagtgccttgcaggctgaactcatcccctcaggctcattcaag
tcggataaaccgcagctgctttttatcagcaaacccaatcctgctgactctatatcaata
aaggagaagtttatccatgcaaagtatgcagaaaaggcatttgttcgcaagccaagagac
caccaaagtactcgatcagtggcacaacaaatctgggaagctgttcgtgctaatgacaag
aaggctgtataccggcttattgttaatcacgaagcagatgtcagtgctgtgtatgagcaa
gcatcttgtagctcttccctgacacgtgctaaaacagtgctattgcaagagctggccaac
cctgacaattgctgctctagctactcaacagggaattcgttggataggtcttccaccatc
tctttaaactttccaggtacaactgaaggccagaccttggaggatgtagatgggtgtacc
ttgcttcacctcgcttgtgaaactgctgacattggcatgctagaacttctcttacagtat
ggtgcaaatataaattcaactgattcgggaggtcagacgccactccaccgttgtattctt
agaggcgaagctggacttgcaaaaatgctcctcacaaggggagcagatccacgtgctgtc
aatggcaaagataaaaccccacttgagcttgcagtagagtccaaatttgatgagagtgag
gtccttgctctattatcagactcaaatggctga
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