Populus nigra (Lombardy poplar): 133680806
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Entry
133680806 CDS
T10372
Name
(RefSeq) cullin-1-like isoform X1
KO
K03347
cullin 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133680806
04120 Ubiquitin mediated proteolysis
133680806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133680806
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
133680806
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
133680806
NCBI-ProteinID:
XP_061959785
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Position
1:40365916..40372351
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AA seq
737 aa
AA seq
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MGERKTIELEQGWEYMQKGITKLKGILDGSLEQFNSEEYMMLYTTIYNMCTQKPPNDYSQ
QLYDKYREAFQVYINSTVLPSIREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFI
ARRSLPPLNEVGLTCFRDLVYQEVNSKAKDAVLDVIGKERDGEQIDRALLKNVLDIFVEI
GMSQMDHYEDDFEAHMLQGTSAYYSVKAANWIREDSCPDYMIKAEECLKRERERVSHYLH
SSSETKLVEKVQHKLLVVHANQLLEKEHSGVRSLLRDDKLDDLSRMFRLYHKVPHGLEPV
SNVFKQHITAEGTALVQQAEDAASSQAANGGVQEQVLIRKIIELHDKYMTYVTDCFQNHT
LFHKAMKEAFEIFCNRTVAGSSSAEQLATFCDTILRKGGSEKLSDEAIEETLEKVVKLLA
YISDKDLFAEFYRKKLARRLLFDRSANDEHERSILSKLKQQCGGQFTSKMEGMVTDLQLA
KEHQSSFDEYLGNNPTTRTGIDLQVSVLTTGYWPSYKSSDINLPAEMARGVEVFKEFYDN
KSKHRKLTWIYSLGSCHINARFDQKPIELVVTTYQACLLMLFNTSDKLGYPEIMTQSNLS
DDDLPRLLHSLSCGKYKILSKEPNTKTVTQNDSFEFNRKFNDRMRRIKVPLPLVDERKKV
VEDVHKDRRYAIDAAIVRIMKSRKVLGHQQLVMECVEQLTRMFKPDIKAIKKRIEDLISR
DYLERDKENPNMFRYLA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgcaagactattgaacttgagcaaggatgggaatatatgcagaaagggatc
acaaagctgaaggggattctggatggatcactggagcaattcaactcagaagaatatatg
atgctttacacaactatctacaatatgtgtactcagaagccacccaatgactattctcag
cagctttatgacaagtacagggaggcgtttcaagtatatataaactccacggtattacca
tcgataagggagaagcatgatgagtttatgctgagggagcttgtgaagagatgggctaac
cataaaattatggttaggtggttgtcacgcttctttcattatcttgaccgttacttcatt
gctcggaggtcacttcctccacttaatgaagttggactgacttgcttccgtgatctggtt
tatcaggaagtgaatagtaaagcaaaggatgccgtgcttgatgtgattggtaaagaacgc
gacggagaacagattgacagagcactgctgaagaatgttttagatatatttgttgagatt
ggaatgtcacaaatggatcattatgaagatgattttgaagcacatatgcttcaaggtact
agtgcttactattctgttaaagcggcaaactggattcgagaggattcctgtccagattac
atgataaaggctgaggaatgcttgaagagagagagagagagagtttctcattacttgcac
tcaagcagtgagacaaagttagtggagaaagtgcaacacaagttgttggtggtccatgcg
aaccaactgctagaaaaggaacattctggagttcgctcattgcttagagatgacaagttg
gatgatctatccaggatgttcaggctttaccataaggtaccccatggcttggaacctgtt
tctaatgtattcaagcagcatattactgctgaaggaacagccttggtccagcaggcagaa
gatgctgcgagtagccaggctgcaaatggtggtgttcaggaacaagttcttatccgaaag
ataattgagctgcatgataaatacatgacttatgtgactgattgctttcaaaaccacacc
ttgtttcacaaggccatgaaagaggcttttgagattttttgcaatagaacagttgcgggg
agctctagtgctgaacaactggctaccttttgtgatactatcctccgaaaggggggaagt
gagaaactaagtgatgaagccattgaagaaacactggagaaggtggttaagctgcttgca
tatattagtgacaaggacctttttgccgaattttatcggaaaaagcttgcccgccgtctt
ctttttgatcgaagtgctaatgatgaacatgaaaggagtattctttcaaaattgaagcag
caatgtggtggtcaattcacctcaaagatggaaggaatggtcacagatttgcaactggca
aaggaacaccagtccagctttgacgagtatcttggcaataacccaaccacacgtactggg
attgatttgcaagttagtgttctcacaactgggtactggccaagttataaatcctccgat
atcaacctgcctgcagaaatggctaggggagtggaagttttcaaggagttctatgacaac
aagagtaagcacagaaaacttacatggatttactcactgggatcttgccacattaatgcc
aggtttgaccaaaaacctattgagctggttgtgacaacctaccaggcttgtctcctgatg
ctttttaatacttcagacaagcttggttaccctgagattatgactcagtcaaacttgagc
gacgatgatttgccccgattacttcattccctgtcatgtggaaagtataagatccttagc
aaggaaccaaacacaaagactgttacccaaaatgattcctttgagttcaatcgcaagttc
aatgacagaatgaggaggatcaaggttcctcttccacttgttgatgaaagaaagaaggtt
gttgaagatgttcacaaagacagacggtatgcaatcgatgctgcaattgtgcgcatcatg
aagagccggaaagttttgggtcatcaacagctagtcatggagtgtgttgagcaactgact
cgcatgttcaagcctgacattaaagctatcaagaagcgaatagaagatctgatatcccga
gactatttagaaagagacaaggaaaacccaaacatgtttaggtacctggcttga
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