Populus nigra (Lombardy poplar): 133680821
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Entry
133680821 CDS
T10372
Name
(RefSeq) peroxisome biogenesis protein 5-like isoform X1
KO
K13342
peroxin-5
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133680821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133680821
Membrane trafficking [BR:
pnz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133680821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_11
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_19
TPR_8
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
133680821
NCBI-ProteinID:
XP_061959806
LinkDB
All DBs
Position
1:complement(45069..53696)
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AA seq
747 aa
AA seq
DB search
MAMRELVTGAAACAVPGSSSSSSNPLGALANALIGSSSKPLEGLKEIPTSTTTATEHPLY
QDATAEDRLRGLPGADFDHSFSQHPTSQGSEFLRRFRTSDQNGFANAWDEIQRSGPPPPP
ALLDHGLPPPQLQPTLDGPPQRVLSNFLHSFVGSSHGGIPFRPAPLPALGLSEGDKQCIR
DRSSIMARHFFADKSEDFINTQVNALLSSLDIDGDVRVKGPLPGRFQELEDYWNESQAAR
RPGPPQADGWVTEFSQHRIDHGDPNVWAHSFEQQHGANGWASEFEQEQLISAADQMGGAN
ISNLSTMEQTRMLAHTLAQNNDPKFQNSKFLQFVSKMSRGELIIDDNQVKPAVLSSPGDW
ATEYQQQYSGGRWADEYARDQLSHGPDQWANEFAAEREQSRPVDDKWVNEFSKLHVDDWA
DEFGRQVGEGAFGESSTDNWADTYDEYLNEQVVAKQKPDASRGVYVFTDMNPYVGHPNPL
KEGQDLFRKGLLSEAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMMRAHEAD
PTNLEVLLALGVSHTNEFEQAAALKYLYGWLQHHQKYRTLATPELSDSLYYANVARLFNE
AAQMAPEDADVHIVLGVLYNLSREYDKAIAFFQTALKLKPQDYSLWNKLGATQANSVQSA
DAILAYQQALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRIS
LSFASRNDMVEACDSRNLDALQKEFPL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgagagcttgtaacaggagcagcagcctgtgctgttccaggttcttcttct
tcatcatctaatcctctcggtgctctcgccaacgctcttatcggttcctcttccaagcct
ctggaagggctgaaggaaattccaacctctacaaccacagctacagagcatccgttgtac
caggatgccactgctgaggaccgcttgagaggactcccgggagctgactttgatcactcc
ttttctcagcatcctacttctcagggttcagaatttcttcgtcgctttcgcacttctgat
cagaatggatttgccaatgcttgggatgagattcagcgctctggtcctcctcctcctcct
gctctattggatcacggcctacctcctcctcagcttcaaccaactttggacggaccaccc
caaagagtgttgtcaaactttttgcactcctttgtgggcagtagccatggtggaattcca
tttcgtcctgctccactacctgcattaggattgtctgaaggtgacaaacaatgcatacgt
gaccgcagcagcataatggcccggcatttttttgctgacaagagtgaagattttatcaat
acacaggtgaatgcacttttgtcttcgttagatattgatggtgatgtgcgggttaaggga
cctttacccggtaggttccaagagctagaggattactggaacgagtctcaagctgctcgg
agacctggtcctcctcaagctgatggatgggttactgaatttagccaacacagaatagat
catggtgatcctaatgtctgggctcactcatttgaacagcagcatggtgctaatggttgg
gcctctgagtttgagcaggaacagttgatctcagcagcagatcaaatgggaggtgcaaat
atctcaaacttatctacaatggaacagactcgaatgcttgcacacacactagctcagaac
aatgaccccaaatttcagaattctaagtttcttcaattcgtctcaaagatgagtcgcggc
gaacttattattgatgacaatcaagtcaagccagccgtgttgtcttcaccaggggattgg
gcaacggaatatcagcaacaatattctgggggtcgttgggctgatgaatatgcacgtgac
cagctttctcatggacctgatcaatgggcgaatgagtttgctgctgaaagagagcaaagt
cggcctgttgatgataagtgggtaaatgaattttcaaagttgcatgttgatgactgggca
gatgaatttggacgacaggttggcgaaggggcttttggggagagttcaactgataattgg
gcagatacttatgatgagtacctaaatgagcaagtagttgccaagcagaagccagatgct
tcaaggggcgtctatgtgtttacagacatgaatccttatgtcggtcacccaaatcctttg
aaagaaggccaggacctattccgcaaggggcttttgagtgaagctgtgcttgctttagag
gctgaagttttgaaaaacccagataacgctgaaggttggaggttgcttggaatagcacat
gcagagaatgatgatgatcaacaggcgattgcagccatgatgcgcgcgcatgaagctgat
cctacaaatcttgaagtgcttcttgctcttggtgtgagccatacaaatgagtttgagcag
gcagctgcattgaaatatttatatggatggctacaacatcatcaaaagtacagaacacta
gccactccagagctttctgattctttgtattatgctaatgttgctagattattcaacgaa
gctgctcagatggcacctgaggatgctgacgtgcacatagtacttggtgtcctgtacaat
ctgtcccgggaatatgacaaagccattgcttttttccagacagctttgaaactcaagcct
caggattactctctttggaacaagcttggtgcaacacaagccaatagtgttcagagtgct
gatgcaatattggcatatcagcaggcacttgatctgaagcctaactatgttcgagcatgg
gcaaacatgggaatcagttatgccaaccagggtatgtatgaggattccatccgatactat
gttcgggcacttgctatgaatcccaaggcagataatgcttggcaatatttgaggatttct
ttaagttttgcttctaggaacgacatggtggaagcttgtgattctcgaaatcttgatgct
ctacagaaggagttcccactataa
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