Populus nigra (Lombardy poplar): 133680828
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Entry
133680828 CDS
T10372
Name
(RefSeq) ABC transporter B family member 2-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133680828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133680828
04147 Exosome [BR:
pnz04147
]
133680828
04090 CD molecules [BR:
pnz04090
]
133680828
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133680828
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133680828
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133680828
CD molecules [BR:
pnz04090
]
Proteins
133680828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_21
AAA_16
RsgA_GTPase
AAA_15
nSTAND1
DUF815
APS_kinase
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
133680828
NCBI-ProteinID:
XP_061959816
LinkDB
All DBs
Position
1:complement(38431816..38439358)
Genome browser
AA seq
1253 aa
AA seq
DB search
MSSQSNIEEADDVETKRQEEKKKQRKVPFWKLFAFADFYDCLLMGLGSLGACVHGASVPV
FFIFFGKLINIIGMAYLFPKEASHKVAKYSLDFVYLSAVILFASWIEVACWMHTGERQAA
KMRMAYLKSMLSQDVSLFDTEASTGEVIAAITSDIIVVQDAISEKVGNFMHYVSRFLGGF
IIGFVRIWQISLVTLSIVPLIALAGGIYAYITIGLIAKVRKSYVKAGQIAEEVIGNVRTV
QAFAGEEKAVRSYVDALRNTYQYGRKAGLAKGLGLGTLHCVLFLSWALLVWYTSIVVHKN
IANGADSFTTMLNVVISGLSLGMAAPDVSSFLRATAAAYPIFEMIERNTLSNTSKKSIKK
LEKVDGHIEFKDVCFGYPSRPDVTIFDKFCLDIPSGKIVALVGGSGSGKSTVISLIERFY
EPLFGQILLDGNDIRDLDLKWLRKQIGLVNQEPALFAASIRENILYGKDDATLEEITRAA
TLSEAMSFINNLPDRFETQVGERGIQLSGGQKQRIALSRAIVKNPCILLLDEATSALDAE
SEKSVQEALDRAMLGRTTVVVAHRLSTIRNADVIAVVQEGKIVEIGSHEELISNPQSTYA
SLVHLQEAASSGGHPSLGPTLGPPLSMKYSQDTRSSFGASFRSDKDSISRAGAGALEPMR
TKNVSLKRLYSMVGPDWIYGIVGTIGAFVAGSLMPLFALGVTQALVAFYMDWDTTRHEVK
KIAILFCCGAVISVIFYGIEHLSFGIMGERLTLRVREMMFSAILRNEIGWFDDFNNTSSM
LTSRLESDATLLRTIVVDRSTVLLHNVGLVVTSFVIAFILNWRITLVVIATYPLIISGHI
SEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEEKILDLYARELVEPSKNSFT
RGQIAGIFYGICQFFIFSSYGLALWYGSVLMEKELAGFKSIMKSFMVLIVTALAMGETLA
LAPDLLKGNQMAASVFEILDRKTQVMGDVGEELKNVKGTIELRGVQFSYPSRPDTLIFMD
FDLRVRSGKSMALVGQSGSGKSSVLSLILRFYDPTAGKVMIDGIDIRKLKVKSLRKHIGL
VQQEPALFATTIYENILYGKEGASETELIEAAKLANAHGFISSLPEGYSTKVGERGVQLS
GGQKQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMRNRTTVMVAHRLSTI
KEADQISVIQGGKIIEQGTHSSLIENKDGSYFKLFRLQQQQGLEQNHDNNEHI
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacaaagcaatattgaagaggcagatgatgtggagacgaagaggcaggaagag
aaaaagaagcaacggaaagttccattctggaagctatttgcttttgctgatttttacgac
tgtctgttaatgggattgggatctcttggtgcttgtgttcatggagcttcagtccctgtc
ttcttcattttctttggaaagttgataaatatcattggaatggcttatctctttcccaaa
gaagcttcccacaaagtagccaagtactcattggattttgtatatctcagtgcggttata
ttattcgcatcgtggatagaggtggcatgttggatgcatactggagaaagacaggcagcg
aagatgagaatggcgtatctgaaatcaatgttaagtcaagatgtaagtctattcgatact
gaagcgtcaaccggagaggtcatagctgctattacaagtgatattattgttgtgcaagat
gccatttctgagaaggttggaaacttcatgcactatgtaagccggtttcttggtggattt
attattgggttcgttaggatatggcaaatcagtctggtgactctatctatagtcccttta
attgcacttgctggtggtatctatgcatatataacaatcggccttattgctaaagttcgt
aaatcttatgtcaaggccggccaaattgctgaggaggtgatcggaaatgttagaacagta
caagcatttgcaggagaagagaaggcagtgaggtcatatgtagacgctcttagaaatacg
taccagtatgggagaaaagcaggcctggccaagggtctcggattggggaccctgcactgt
gtcctttttctttcatgggcattacttgtttggtacactagcatagttgtccacaagaat
atcgccaatggtgctgactctttcaccactatgctcaatgttgtcatttctggcctgtca
ctgggaatggctgcgccagatgtttcttcatttctccgagccacagcagcagcctaccct
atttttgagatgatagagaggaacacattgagtaataccagcaaaaaatctatcaagaaa
ctagagaaagttgatggccacattgaattcaaagatgtatgttttgggtacccttctcgt
cctgatgtaacaatcttcgacaaattctgcttagatatcccttctgggaagattgtagct
cttgtaggaggaagtgggtcaggaaagagcacggtaatatctttgatcgaacgattttat
gagcctttatttgggcaaatactgttagatgggaatgatattcgggaccttgacctcaag
tggcttaggaagcaaatagggctagttaatcaggagcctgctctttttgcagcaagtatt
agagagaacattctctatgggaaagatgatgctacacttgaggagattacacgtgctgct
acactttcagaagcaatgtcttttatcaacaacctcccagatagatttgaaacacaggtt
ggtgagagaggaatacagttatcaggtgggcaaaagcaaaggattgcattatcacgtgct
attgtgaaaaatccatgcattcttttgcttgatgaagctacaagtgcactggatgctgaa
tctgagaaaagtgtgcaagaggctcttgatcgtgcgatgctcggaagaactactgtagtt
gtggctcatcggctttctacaataaggaatgctgatgtcattgcggtagttcaggaaggg
aagatagtagaaatcgggagccacgaggagctcatttcaaaccctcaaagtacctacgct
tcactcgttcatctccaggaggcagcttcctcgggaggccatccttcactcggtcctacc
ttaggaccaccactcagcatgaagtattctcaagacacaagatcaagctttggagcaagt
tttcgttctgacaaggattcaattagccgggctggtgctggtgcattggagcccatgagg
acaaagaatgtttcattgaaaagattgtattcaatggttggccctgattggatttacggt
atagttggaaccattggtgcatttgttgctggatccctgatgccgcttttcgctcttgga
gtcactcaggctcttgtagccttttacatggactgggacacgactcgccatgaagtcaag
aagattgcgatcctgttttgttgtggtgcagtaattagtgttatattctatggcatcgaa
catctctcttttggaatcatgggagagcgactcactcttcgtgttagagaaatgatgttc
tccgccattttgaggaacgagattggttggtttgatgatttcaacaatacaagctctatg
ctcacatctcgtctagagagtgatgcaactttgttacgaactatagttgttgatcgctca
accgttctcttgcacaatgttggtttggttgtcacatcatttgtcatcgccttcatattg
aactggaggatcacacttgttgtcatagccacgtatccactgatcattagtggtcacata
agcgagaaactcttcatgaagggctatggtggcaacttgagcaaagcatatctaaaggct
aacatgctagctggtgaggctgtgagtaacattcgcactgttgctgcattttgtgctgaa
gaaaagatacttgacctttacgcccgtgagcttgtagaaccttccaagaactcattcacc
cgtggtcagattgctggcatattctatggcatatgccagttcttcattttctcatcttat
gggcttgctttatggtacggttctgttctgatggagaaggagctcgctggctttaaatcc
ataatgaagtcatttatggttttgattgtaacagcattagccatgggtgaaactctagcg
ttggccccagatcttctgaaagggaaccaaatggcagcatctgtctttgagatactggat
cgcaagacacaggtgatgggggatgttggagaagagttgaaaaatgtgaagggtacaata
gagttgagaggtgtccaatttagctatccttcaagaccagatacattgattttcatggac
tttgatctaagagtgcgttcaggcaagagcatggctttggtgggacaaagtggttctggt
aaaagctctgtcctttctctgatacttcgattctacgatccaacagcaggaaaagtgatg
attgatggcatagatatcaggaaactcaaggtgaaatctcttcgaaagcacataggccta
gtccaacaagagccagctctctttgccacaacgatctatgaaaacatattgtatggaaaa
gaaggagcctctgaaacagaattaattgaagcggctaagctcgccaatgctcatggtttc
attagttctcttcctgagggttactcgaccaaagttggtgaacgaggggtgcaattatca
ggtggccaaaagcaaagggtggccattgcccgagccgtcctaaaaaatccagaaatattg
ctacttgatgaagccactagtgctctagatgtggagtctgagcgtattgtgcaacaagct
ctggacagattgatgaggaaccgaacaacagtcatggtggcacataggctatcgactata
aaggaagcagaccaaatatcagttatacaaggggggaaaataatagagcaagggactcat
tctagtcttatagaaaacaaagacgggtcatatttcaagttgtttcgtcttcagcaacaa
caaggacttgaacagaatcatgacaacaatgaacatatatag
DBGET
integrated database retrieval system
