Populus nigra (Lombardy poplar): 133680844
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Entry
133680844 CDS
T10372
Name
(RefSeq) sister chromatid cohesion 1 protein 3
KO
K06670
cohesin complex subunit SCC1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133680844
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133680844
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
133680844
NCBI-ProteinID:
XP_061959841
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Position
1:26047823..26054524
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AA seq
772 aa
AA seq
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MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL
LGVVRIYKKKVDYLFQDCTVALAGLNKAFTTTEVNLPENATTATFESITLPPTLNLDGFD
MSDYLDPEGSPDNHLKSYEEITIPDQISPYITIHVDEDNICPSVPEHDPGSEARPVDDIH
PPPPVSGDSPSQDTGQRTQTAVNNETGPGASNQTDVLVDDMDFHDPGQSNQPEDPMDTED
FRDPAPSNQTEVLMHTGDFQDPGPSNQTSVPTETLNQSLSGENSPPEIEVMRDAATDLGS
ESFPPLSPTRKDDATEPNRSLDEVLNEKDFLSPIMEDALPSLEKSLPFQQHSKAPTSAAS
QDIPDVFDTHGSFGNISPQFAIRSTPPGPPPAQQPQPGPPPAQQPRPRRRRMQFDGATVL
TNRFMRRALEDPSDLMRQKRTRSSSMVGIWRLNNSLRKEQIFYEPLITGSCEDLCRLSEK
DYITTKPHLTLEQGAISEHGVATSPGPETEAIPEPRMSSSPASTAEPISEPMIAQSPVPG
RQSGMEKERTQQDLGCYDHSVLPEIDMEIERLRNDGGHDGNDFLSDLPSPAMPMPSPGRF
MSSSLRRDDFTPMPISSFGSGTVPQEGTSTTVHTPEFSASPGTYQLGEQNTGLSDIPELM
KTAEDDDLAKILEADNTPVGSLGTRDIDSLSVRTRGVAKYLKEHSPIIPLSEESSGDISL
TSILQGKTRKLCARMFFETMVLKSYGLIDVQQEEPYGDIALKLTSTLSKARL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagacgttcttagcaaggaagggccctttagggactgtttggtgcgct
gctcatcttcaacacaggctcaagaaatctcactatacctccactgatatcccctccact
gtcgatcgaattatgttcccggaagttccgattgcgttgagaatgtcaagccaccttctg
ctaggtgttgttcggatatataaaaagaaagttgattaccttttccaagattgtactgtt
gctcttgctgggctaaacaaggctttcacaactacagaagttaatttgccagagaacgcc
acaacagcaacattcgagtctatcactttgccaccaaccctcaaccttgatggctttgac
atgagtgattacttagatcccgaagggtccccggataatcatctcaagagttacgaggaa
atcacgataccagatcaaatttctccttacatcaccatacatgtcgatgaggataatatc
tgtccatcagttccagaacacgatcctggttcagaggctagaccagtggatgatatccat
ccaccacctccagtcagtggtgactcgccttctcaagatacaggtcaaaggactcagaca
gctgtgaataacgagactggacccggtgcaagtaatcagacagatgtgcttgtggacgat
atggattttcatgatcctggtcaaagtaatcaaccagaagacccaatggatactgaggat
tttcgagatcctgctccaagtaatcagacagaagttctaatgcacactggggattttcag
gatccgggtccaagtaatcagacatcagtacctactgagactcttaaccaaagtcttagt
ggagaaaattcccctccagaaattgaagttatgcgtgatgctgccactgatttgggctca
gaaagctttcctccattgagtccaactagaaaggatgatgcaactgaaccaaatagatct
ttagacgaagttctaaatgagaaggatttcctttctccaataatggaagatgctttacct
tctcttgagaagtccttaccatttcagcagcattcaaaagcacctacttctgctgcttca
caagatattcctgatgtttttgacacacatggttcatttgggaatatatcacctcaattt
gccattcgttcaactccacctgggcctccacctgctcagcagccacaaccagggcctcca
cctgctcagcagccacggccaaggaggaggaggatgcaatttgatggggccacagtgttg
actaataggtttatgaggagggcacttgaggatcctagtgatctgatgcgacagaagagg
acgaggtcatcctcaatggtgggtatatggaggttgaacaatagtttgagaaaggaacaa
atcttttatgagcctttgataactgggtcttgtgaagatttatgcagactttctgagaag
gattatattactacaaaacctcatttgactcttgaacagggagctatttcagagcatggg
gttgcaacatctcctggccctgaaactgaagccatccctgagcctaggatgtcaagctct
cctgcttccacagccgaacccatctcagagcctatgattgcacaatctcctgttccagga
cgtcagtctggcatggaaaaggagcgaacccaacaggatctaggctgttatgaccacagt
gttttacctgaaattgatatggaaatcgaacgacttcgaaatgatggaggtcatgatggc
aatgactttttatcagacctgccttctccagcaatgcccatgccttctccaggaagattc
atgtcttcttctcttagaagagatgacttcactcccatgccaataagcagctttggatca
ggaacagtaccccaggaaggaacatctacaactgtgcacactccagaattttcagcttcc
cctggaacttatcagttaggtgaacagaacactgggctctctgatattcctgaattgatg
aagactgcagaagatgacgaccttgctaaaatactagaagcagacaacacaccagttgga
tccctaggtactcgagacattgattcattgtctgtgaggacaaggggtgtggctaaatat
ttaaaagaacattctcctattatcccattgtcagaagagtcatctggagatatcagtctc
accagtatcttacaaggaaaaacgagaaagttatgtgctcggatgttctttgaaacaatg
gttttgaagagctatgggcttattgatgtacaacaggaggaaccttatggtgacattgct
ttgaagttgacttcaacgctatcgaaggcccgattatga
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