Populus nigra (Lombardy poplar): 133680916
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Entry
133680916 CDS
T10372
Name
(RefSeq) Golgi SNAP receptor complex member 1-1-like
KO
K08495
golgi SNAP receptor complex member 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133680916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133680916
Membrane trafficking [BR:
pnz04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
133680916
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
Baculo_PEP_C
P22_AR_C
MnmE_helical
NET2A_C
Bap31_Bap29_C
DUF6634
MscS_porin
Not3
COG5_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
133680916
NCBI-ProteinID:
XP_061959945
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Position
1:46247641..46252094
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AA seq
226 aa
AA seq
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MEVTTTSSWDALRKQARKLEAQLDEQMNSYRKLASSKGSTKVDSAENDPESGIDRLLKQL
QQVNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSGMRAKQEHALLLEDFREF
DRTRLDLEDGVGSADQALLREHASISRNTGQMDNVISQAQATLGSLVLQRSTFGGINSKL
SNVSSRLPTVNQILSAIKRRKSMDSIILSLVASVCTFLIFIYWVTK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactactacttcttcatgggacgctttacgcaaacaggcgaggaaactcgaa
gctcagttagatgagcagatgaactcatatcgtaaactggcatcctcaaagggttctaca
aaagttgattctgcagagaatgatcctgaatctgggatagaccgactattaaaacagctc
caacaagtaaattcacagatgcaagcatgggtatcatctggaggatcagaaatggtttct
cacaccttgactcggcatcaggaaattcttcaagatcttactcaggagtttcatcgtctc
cgttctggcatgagggctaagcaagaacatgctctgcttctggaggattttagagagttt
gatcgaacaagattagatttggaagacggtgttggttctgcagaccaagctctccttaga
gagcatgcatccattagccgaaataccggtcagatggataatgtgatttcacaagctcaa
gcaactcttggttcacttgttcttcaacgttcaacttttggaggaattaattcaaagctg
agtaatgttagcagccgcctcccaacggtaaatcaaattctgtcagcaataaagaggaga
aagtccatggattccatcatactttccctggttgcttccgtatgcacttttcttattttt
atttactgggtgaccaagtaa
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