Populus nigra (Lombardy poplar): 133680975
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Entry
133680975 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133680975
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133680975
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133680975
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133680975
03036 Chromosome and associated proteins [BR:
pnz03036
]
133680975
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133680975
Peptidases and inhibitors [BR:
pnz01002
]
Metallo peptidases
Family M67
133680975
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133680975
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
133680975
BRISC complex
133680975
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
133680975
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
133680975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
133680975
NCBI-ProteinID:
XP_061960032
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All DBs
Position
1:34946756..34953325
Genome browser
AA seq
434 aa
AA seq
DB search
MSLTSVKMTEEVWLTCLTHALSTETEEILGLLLGDIEYAKDGNVTALIWGASPQSRSDRR
KDRVETKPEQLAAASAQAERMTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
PGFIGLIFSCFNEDVNKVGRIQVIAFQSSDGKQNNMLRPVSALPVNKSSIIELDSSSSDI
ASLEGPELDTADSRAAGSSKGGARSLGLGDFFANADANYVGRERIGGNYYSSNSGDKITD
IDPMDMSESMQEAMHRSNLDMSGAEYSRREIPLHVLPTCSLLKLDSPLMSFGDLQRVLYE
EERGAYNQAILQNMRNGKVHPLTFIHHTATYQASMCKLIEYCLSPAINALQGRLRENDIR
LATLADEAKMLEMETAKGSELQISPSSSRSPRQVPSPGLRGSALSGQRDFHGSSESFSSR
TVASPGSRSRTSSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacgagcgtgaagatgacagaggaagtctggttaacatgtcttacccatgcg
ttgtctaccgagactgaagaaatccttggcctcctccttggtgatattgagtatgcgaaa
gatggcaatgttactgcattaatatggggagcctcacctcagtcaagatctgataggaga
aaggaccgggtagagacaaaaccggaacagttggctgcagcatcagctcaagctgagaga
atgactgcatcaacaggacgaacaacaagagtgatagggtggtatcattcacaccctcat
attactgtgcttccttctcatgttgatgtgaggacccaggcaatgtaccaacttctagat
cctgggtttatcggcctgatattttcctgttttaatgaggatgtcaataaggttggaaga
atccaagtcattgctttccagtcctcagatgggaaacagaataacatgttaagacctgtt
tctgcattgcctgtaaataaaagttcaataatagagcttgattcatcttcctcagatatt
gcaagtctggagggccctgaactggacactgctgattcaagagctgcaggatccagtaag
ggtggggcaagatctttgggtcttggggatttctttgctaatgctgatgccaactatgtt
gggagagaaagaattggaggaaactactatagcagcaattcaggtgataagataactgat
atagaccccatggacatgtcagagagtatgcaggaagctatgcaccgctcaaatttggac
atgagtggtgcggagtattccagaagagaaattcctcttcatgttttgcccacatgctct
ctgcttaagcttgattcacctctaatgtcatttggtgatttgcaacgtgtgttatatgaa
gaggagcgtggagcatacaaccaagccatcttgcagaatatgaggaatggaaaagtacat
cccttgactttcattcaccacacagcaacatatcaggcttccatgtgcaaattgattgaa
tactgtctaagtcctgccataaatgctctccagggccgcttgagagagaacgatattcgg
ttagcaacacttgctgatgaagccaagatgttggagatggaaaccgctaaagggagtgag
ttacagatctccccgtcaagttccagatctccccgtcaagttccatctcccggactacga
ggaagtgctttgtctggtcagagggactttcatggttcatcagaatcttttagttcgagg
actgttgccagccctggcagccgaagcagaacaagctcctcatag
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