Populus nigra (Lombardy poplar): 133681145
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Entry
133681145 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133681145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133681145
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133681145
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133681145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
133681145
NCBI-ProteinID:
XP_061960268
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All DBs
Position
1:complement(48344715..48348848)
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AA seq
297 aa
AA seq
DB search
MTIRNKPEVIDPPQNKDMTDIFECVNSPAKTALKPNVTVSSSVHELLECPVCLNAMYPPI
HQCSNGHTLCSSCKPRVHDRCPICRHELGNIRCLALEKVAASLELPCIYQSFGCIGIYPY
HSKSKHESQCVFRPYSCPYSGSECTAIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKSNP
HEVENATWMLTVFSCFGQYFCLHFEAFHLGMSPVYIAFLRFMGDDNEAKNHSYRLQVCGS
GRKMTWQGVPRSIRDSHRKVRDSFDGLVIQRNMALLFSGGDRKELKLRVTGRIWKEQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccgaaataagcctgaggttattgatcctcctcaaaataaagacatgacagat
atctttgaatgtgtaaacagtcctgctaagacagctttaaaacctaatgtgactgtgtct
agcagtgttcatgaattattggagtgtcccgtgtgcttaaatgccatgtatcctccaatt
catcagtgttcaaatggtcacacattatgttccagttgcaagcccagagttcatgaccga
tgccccatttgcaggcatgaacttggcaacattagatgtcttgcgctagagaaagttgct
gcatctcttgaacttccatgtatttatcagagttttgggtgcataggaatatacccttat
cacagcaagtcaaaacatgaatcccaatgtgtttttagaccgtatagctgcccatattct
ggatcagaatgcacggctattggtgatattccttatctggtggcacatttgaaagatgat
cacaaagttgacatgcataatggcagtactttcaaccacagatatgtcaaatcaaatcca
catgaagttgagaacgcaacatggatgctgacggtttttagctgttttggtcagtatttt
tgtctgcattttgaagcattccacctcgggatgtccccagtctacatagcattcctgagg
tttatgggcgatgacaatgaggcaaagaaccatagttaccgtcttcaagtatgtggaagt
ggtaggaagatgacatggcaaggggtgcctaggagcattagggatagccaccggaaggtt
cgggacagttttgatggtcttgttatccagcgcaacatggcccttttattctctggtgga
gatcggaaggaattgaagcttcgggtgactggtcggatttggaaagaacagtga
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