Populus nigra (Lombardy poplar): 133681553
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Entry
133681553 CDS
T10372
Name
(RefSeq) autophagy-related protein 8f-like isoform X1
KO
K08341
GABA(A) receptor-associated protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
pnz04145
Phagocytosis
pnz04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133681553
04136 Autophagy - other
133681553
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
133681553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133681553
04121 Ubiquitin system [BR:
pnz04121
]
133681553
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133681553
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133681553
Ubiquitin system [BR:
pnz04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
133681553
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133681553
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
133681553
NCBI-ProteinID:
XP_061960612
LinkDB
All DBs
Position
2:complement(45152446..45155010)
Genome browser
AA seq
122 aa
AA seq
DB search
MTKSRFKQEHDFEKRRAETARIREKYPDRIPVIVEKAERSDIPNIDKIKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYDEKKDEDAFLYVTYSGENTFGCQI
LP
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagccgtttcaagcaagagcatgatttcgagaagaggagggctgaaactgcg
agaatcagggagaaatacccggacaggattccggtcattgtggagaaggctgagagaagc
gatattcccaacattgacaagataaaatacctagtcccggctgacctgacagtcggtcaa
tttgtttatgtgatccggaagagaattaaactgagtgcagaaaaggcaatttttatattt
gtggacaatgtcctcccaccaactggagcaataatgtcgtcaatctatgatgaaaagaag
gatgaggatgcatttctctatgtcacatacagtggggaaaacacatttgggtgccagatc
ttgccatag
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