Populus nigra (Lombardy poplar): 133681642
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Entry
133681642 CDS
T10372
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
pnz03015
mRNA surveillance pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133681642
09122 Translation
03013 Nucleocytoplasmic transport
133681642
03015 mRNA surveillance pathway
133681642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133681642
03041 Spliceosome [BR:
pnz03041
]
133681642
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133681642
Spliceosome [BR:
pnz03041
]
Complex C
Other components
EJC/TREX
133681642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
133681642
NCBI-ProteinID:
XP_061960718
LinkDB
All DBs
Position
2:complement(45878556..45880780)
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AA seq
152 aa
AA seq
DB search
MAAMEEDSGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
AVLKECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVHSSQ
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatggaggaagatagcggagagttctatcttcgttactacgttggtcacaga
ggtaaattcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatac
gcaaacaactctaattacaaaaacgacaccatgattcgtaaagaagtcttccttaccccc
gccgttctcaaagagtgccgccgcatcatctccgagagcgaaattatgaaggaagatgac
aacaactggccagagccggaccgagttgggaggcaagagctggagattgtgatggggaat
gagcatatttcatttactacgtctaagattggatcacttgttgatgttcacagtagccag
gatcctgaagggcttcgcatcttctattatcttgttcaggacttgaagtgctttgttttc
tctctcatctcccttcacttcaaaatcaagcccatataa
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